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Seed proteins  | Seed protein 3D structures  |  Structural homologs

Seed protein information help

APIS family ID psia
Inhibited defense system SOS response
CLAN ID CLAN071
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
WP_042934779.1 gene_page: psia 243 28599.95 8.8190 7.0
Phage property
Phage Genbank id
Enterobacteriaceae
PMID/References Samuel and Burstein, 2023
PDB structures ;
Pfam domains PF06952.16
Phrog
Host taxa d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;
Gene Location Start: ;  End: ;  Strand: 
Description SOS-inhibitor.

Predicted 3D structure by alphafold2 with pTM = 0.52 Download help

pTM is for the estimate of the TM-score, which is obtained from a pairwise error prediction. The higher pTM score indicates better model quality.

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Structural homologs

No homologs found in AlphaFold database

No homologs found in esmfold database