logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000032_1|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Created with SnapCAZymeTFnullTC9840119861413316280184272057422721248682701529162

Gene composition table

Protein IDProtein NameTypeStartEndStrandSignature
MGYG000000032_00011
Alpha-galactosidase
CAZyme 9840 11309 - GH4
MGYG000000032_00012
HTH-type transcriptional activator RhaS
TF 11480 12415 + HTH_AraC+HTH_AraC
MGYG000000032_00013
hypothetical protein
CAZyme 12682 13629 + GT108
MGYG000000032_00014
hypothetical protein
null 13645 15051 + SBP_bac_8
MGYG000000032_00015
L-arabinose transport system permease protein AraP
TC 15108 16007 + 3.A.1.1.28
MGYG000000032_00016
L-arabinose transport system permease protein AraQ
TC 16033 16863 + 3.A.1.1.46
MGYG000000032_00017
4-O-beta-D-mannosyl-D-glucose phosphorylase
CAZyme 16885 17964 + GH130
MGYG000000032_00018
putative HTH-type transcriptional repressor ExuR
TF 17987 19024 + LacI
MGYG000000032_00019
Oligo-1,6-glucosidase
CAZyme 19025 20602 + GH13_31| GH13_23| GH13
MGYG000000032_00020
hypothetical protein
CAZyme 20614 23094 + GH2
Protein IDProtein NameTypeStartEndStrandSignature
Showing 1 to 10 of 16 entries

Substrate predicted by dbCAN-PUL is galactomannan download this fig


Genomic location

2,037 Pageviews
Mar. 05th - Apr. 05th