dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01629
Location and strand information: 47024 - 49387 (+)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0663
Protein molecular weight: 89969.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01630
Location and strand information: 49359 - 50546 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 5.0793
Protein molecular weight: 45502.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01631
Location and strand information: 50584 - 51480 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01632
Location and strand information: 51596 - 54049 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 5.2691
Protein molecular weight: 93042.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01633
Location and strand information: 54030 - 55394 (+)
Family: null
Protein type: null
Protein description: putative FMN/FAD exporter YeeO

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01634
Location and strand information: 55476 - 56507 (+)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01635
Location and strand information: 56708 - 57829 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01636
Location and strand information: 57848 - 58753 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01637
Location and strand information: 58858 - 60507 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01638
Location and strand information: 60639 - 62384 (+)
Family: GH35
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.7014
Protein molecular weight: 67079.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01639
Location and strand information: 62429 - 63337 (+)
Family: GH43|GH43_22
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7504
Protein molecular weight: 34661.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01640
Location and strand information: 63339 - 65141 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-glucuronidase
Protein isoelectric point: 4.8395
Protein molecular weight: 68332.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01641
Location and strand information: 65185 - 67116 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 5.1032
Protein molecular weight: 73634.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_8|CGC1
Gene ID: MGYG000000245_01642
Location and strand information: 67164 - 68477 (-)
Family: CBM51|GH27
Protein type: CAZyme
Protein description: Alpha-galactosidase A
Protein isoelectric point: 4.8237
Protein molecular weight: 49535
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000245_01629	GH78_e36
MGYG000000245_01630	GH88_e1
MGYG000000245_01632	GH2_e38\|3.2.1.23	beta-galactan
MGYG000000245_01638	GH35_e2\|3.2.1.38\|3.2.1.23\|3.2.1.-	pectin\|beta-galactan
MGYG000000245_01639	GH43_e210
MGYG000000245_01640	GH2_e0\|3.2.1.31	beta-glucuronan
MGYG000000245_01641	GH127_e0\|3.2.1.185	arabinogalactan
MGYG000000245_01642	GH27_e20\|CBM51_e6\|3.2.1.88	arabinogalactan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-galactan|arabinogalactan

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000245_01629	hypothetical protein	CAZyme	47024	49387	+	GH78\| CBM67
MGYG000000245_01630	Unsaturated chondroitin disaccharide hydrolase	CAZyme	49359	50546	+	GH88
MGYG000000245_01631	HTH-type transcriptional activator RhaR	TF	50584	51480	+	HTH_AraC
MGYG000000245_01632	Beta-galactosidase BoGH2A	CAZyme	51596	54049	+	GH2
MGYG000000245_01633	putative FMN/FAD exporter YeeO	null	54030	55394	+	MatE\| MatE
MGYG000000245_01634	Catabolite control protein A	TF	55476	56507	+	LacI
MGYG000000245_01635	hypothetical protein	TC	56708	57829	+	3.A.1.1.10
MGYG000000245_01636	L-arabinose transport system permease protein AraQ	TC	57848	58753	+	3.A.1.1.29
MGYG000000245_01637	hypothetical protein	null	58858	60507	+	SBP_bac_8\| DUF3502
MGYG000000245_01638	Beta-galactosidase	CAZyme	60639	62384	+	GH35
Protein ID	Protein Name	Type	Start	End	Strand	Signature