logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001338_1|CGC10

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Created with SnapCAZymenullTCTF555055557115559175561235563295565356567416569476571536573596

Gene composition table

Protein IDProtein NameTypeStartEndStrandSignature
MGYG000001338_00511
hypothetical protein
CAZyme 555055 557505 - GH2
MGYG000001338_00512
hypothetical protein
null 557483 559729 - No domain
MGYG000001338_00513
hypothetical protein
null 559774 561240 - DUF3502
MGYG000001338_00514
L-arabinose transport system permease protein AraQ
TC 561267 562184 - 3.A.1.1.29
MGYG000001338_00515
putative multiple-sugar transport system permease YteP
TC 562202 563173 - 3.A.1.1.29
MGYG000001338_00516
hypothetical protein
null 563269 564762 - SBP_bac_8| DUF3502
MGYG000001338_00517
Regulator of RpoS
TF 564910 566427 - HTH_AraC+HTH_AraC
MGYG000001338_00518
hypothetical protein
TC 566405 568120 - 8.A.59.2.1
MGYG000001338_00519
hypothetical protein
CAZyme 568267 571386 - GH38
MGYG000001338_00520
hypothetical protein
CAZyme 571492 572787 - GH125
Protein IDProtein NameTypeStartEndStrandSignature
Showing 1 to 10 of 11 entries

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is galactomannan download this fig


Genomic location

1,900 Pageviews
Mar. 16th - Apr. 16th