dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004889_5|CGC1
Gene ID: MGYG000004889_00227
Location and strand information: 117 - 2789 (-)
Family: GH3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0061
Protein molecular weight: 98952.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004889_5|CGC1
Gene ID: MGYG000004889_00228
Location and strand information: 2882 - 5068 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 4.9382
Protein molecular weight: 79270.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004889_5|CGC1
Gene ID: MGYG000004889_00229
Location and strand information: 5093 - 7921 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.0494
Protein molecular weight: 107537.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004889_5|CGC1
Gene ID: MGYG000004889_00230
Location and strand information: 7936 - 10305 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004889_5|CGC1
Gene ID: MGYG000004889_00231
Location and strand information: 10382 - 11290 (-)
Family: 3.A.1.1.27
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000004889_5|CGC1
Gene ID: MGYG000004889_00232
Location and strand information: 11287 - 12159 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004889_5|CGC1
Gene ID: MGYG000004889_00233
Location and strand information: 12163 - 14436 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004889_5|CGC1
Gene ID: MGYG000004889_00234
Location and strand information: 14423 - 16507 (-)
Family: TPR_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004889_5|CGC1
Gene ID: MGYG000004889_00235
Location and strand information: 16545 - 17438 (-)
Family: 3.A.1.1.39
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000004889_5|CGC1
Gene ID: MGYG000004889_00236
Location and strand information: 17447 - 18364 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004889_00227	hypothetical protein	CAZyme	117	2789	-	GH3
MGYG000004889_00228	Beta-glucosidase BoGH3B	CAZyme	2882	5068	-	GH3
MGYG000004889_00229	Beta-galactosidase	CAZyme	5093	7921	-	GH2
MGYG000004889_00230	hypothetical protein	null	7936	10305	-	Gal_mutarotas_2\| Glyco_hydro_31
MGYG000004889_00231	Lactose transport system permease protein LacG	TC	10382	11290	-	3.A.1.1.27
MGYG000004889_00232	hypothetical protein	TC	11287	12159	-	3.A.1.1.11
MGYG000004889_00233	hypothetical protein	null	12163	14436	-	DUF5696
MGYG000004889_00234	hypothetical protein	STP	14423	16507	-	TPR_2
MGYG000004889_00235	L-arabinose transport system permease protein AraQ	TC	16545	17438	-	3.A.1.1.39
MGYG000004889_00236	L-arabinose transport system permease protein AraP	TC	17447	18364	-	3.A.1.1.29
Protein ID	Protein Name	Type	Start	End	Strand	Signature