dbCAN-seq: a database of CAZyme sequence and annotation

You are browsing environment: HUMAN GUT

help

You are here: Home > Substrate: carrageenan

carrageenan

help

Water-soluble linear sulfated galactans from red seaweeds. They consist of repeating disaccharide units with alternating 3-linked β−d-galactopyranose and 4-linked α-galactopyranose or 3, 6-anhydro- α-galactopyranose. Between the units are α-1,3 glycosidic bonds. kappa, iota, and lambda carrageenan are three main types based on the number of sulfate groups on the repeating disaccharide units.

References

Li, J., He, Z., Liang, Y., Peng, T. and Hu, Z., 2022. Insights into Algal Polysaccharides: A Review of Their Structure, Depolymerases, and Metabolic Pathways. Journal of Agricultural and Food Chemistry, 70(6), pp .1749-1765. Click here to redirect detail information.
Zia, K. M., Tabasum, S., Nasif, M., Sultan, N., Aslam, N., Noreen, A., & Zuber, M. (2017). A review on synthesis, properties and applications of natural polymer based carrageenan blends and composites. International journal of biological macromolecules, 96, 282–301. Click here to redirect detail information.

CAZyme Gene Cluster:

Browse by Substrate_CGCs

Search:

Show entries

Substrate	Genome_ID	CGC_ID	CGC_Content	PUL_ID	Species Name
carrageenan	MGYG000000003	MGYG000000003_8\|CGC1	1.B.14.6.1,8.A.46.1.3,null,GH110,GH110,null,null,GH110	PUL0149	Alistipes shahii
carrageenan	MGYG000000284	MGYG000000284_35\|CGC1	8.A.46.1.3,1.B.14.6.1,FecR,GerE,1.A.1.24.3,GH110,null,1.B.14.6.1,8.A.46.1.3	PUL0149	Parabacteroides sp900540715
carrageenan	MGYG000000437	MGYG000000437_2\|CGC1	8.A.46.3.2,1.B.14.6.1,GH43\|GH16\|GH43_24,GH110,GH110	PUL0149	Alistipes sp001941065
carrageenan	MGYG000000722	MGYG000000722_15\|CGC1	GH110,null,8.A.46.1.3,1.B.14.6.1	PUL0149	RC9 sp900545245
carrageenan	MGYG000001420	MGYG000001420_2\|CGC8	GH110,GH110,GH43\|GH16\|GH43_24,1.B.14.6.1,8.A.46.3.2	PUL0149	Alistipes senegalensis
carrageenan	MGYG000001546	MGYG000001546_5\|CGC9	GH110,GH110,GH43\|GH43_24\|GH16,1.B.14.6.1	PUL0149	Alistipes provencensis
carrageenan	MGYG000001562	MGYG000001562_14\|CGC3	GH110,GH110,GH43_24\|GH43\|GH16,1.B.14.6.1,8.A.46.3.2	PUL0149	Alistipes timonensis
carrageenan	MGYG000001591	MGYG000001591_104\|CGC1	CBM66\|GH51,null,null,2.A.1.1.3,GH127,null,GH127	PUL0148	Parabacteroides timonensis
carrageenan	MGYG000001995	MGYG000001995_27\|CGC1	GH127,null,GH127,2.A.1.1.55,null,null,GH51\|CBM66	PUL0148	Parabacteroides sp900541965
carrageenan	MGYG000002418	MGYG000002418_1\|CGC24	GH127,null,GH127,2.A.1.1.3,null,null,CBM66\|GH51	PUL0148	Parabacteroides chinchillae

Showing 1 to 10 of 20 entries

You are here: Home > Substrate: carrageenan

Who is visiting me?