| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G28340.1 |
| Family | CBM57 |
| Protein Properties | Length: 627 Molecular Weight: 68418.8 Isoelectric Point: 8.4523 |
| Chromosome | Chromosome/Scaffold: 1 Start: 9940175 End: 9943549 |
| Description | leucine-rich repeat family protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 208 | 360 | 1.3e-26 |
| FDEDYRGDHWGGDRFWNRMRSFGKSADSPRSTEETIKKASVSPNFYPEGLYQSALVSTDDQPDLTYSLDVEPNRNYSVWLHFAEIDNTITAEGKRVFDVV INGDTFFEDVDIIKMSGGRYAALVLNATVTVSGRTLTVVLQPKAGGHAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 627 Download |
| MMLRFILASL LLSSFSLYSS LARPAPYALR ISCGARKNVR TPPTYALWFK DIAYTGGVPA 60 NATTPTYITP PLKTLRYFPI SEGPNNCYNI VRVPKGHYSV RIFFGLVDQP SFDKEPLFDI 120 SIEGTQISSL KSGWSSQDDQ VFAEALIFLL GGTATICFHS TGHGDPAILS IEILQVDDKA 180 YSFGEGWGQG VILRTATRLT CGTGKSRFDE DYRGDHWGGD RFWNRMRSFG KSADSPRSTE 240 ETIKKASVSP NFYPEGLYQS ALVSTDDQPD LTYSLDVEPN RNYSVWLHFA EIDNTITAEG 300 KRVFDVVING DTFFEDVDII KMSGGRYAAL VLNATVTVSG RTLTVVLQPK AGGHAIINAI 360 EVFEIITAEF KTLRDEVSAL QKMKKALGLP SRFGWNGDPC VPPQHPWSGA NCQLDKNTSR 420 WFIDGLDLDN QGLKGFLPND ISKLKHLQSI NLSENNIRGG IPASLGSVTS LEVLDLSYNS 480 FNGSIPETLG ELTSLRILNL NGNSLSGKVP AAVGGRLLHR ASFNFTDNAG LCGIPGLPAC 540 GPHLSSGAKI GIAFGVSLAF LLIVACAMIW WKRRQNILRA QQIAARGAPY AKKRTHVSHD 600 IQMSRHGHNN HGQARTAVEN GPSLLS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 3.0e-15 | 374 | 514 | 146 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 9.0e-16 | 426 | 537 | 112 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 3.0e-16 | 201 | 360 | 161 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 1.0e-67 | 31 | 365 | 351 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 22 | 626 | 605 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0007165 | signal transduction |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF16758.1 | 0 | 1 | 624 | 1 | 624 | AC010155_11 F3M18.23 [Arabidopsis thaliana] |
| EMBL | CBI30598.1 | 0 | 25 | 626 | 23 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 1 | 626 | 1 | 626 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002305781.1 | 0 | 29 | 626 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 2 | 626 | 1 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 0.000000000000001 | 398 | 547 | 608 | 752 | A Chain A, L-rhamnulose-1-phosphate Aldolase From Escherichia Coli ( Mutant E192a-k248w-a273s) |
| PDB | 3rj0_A | 0.0000000005 | 423 | 513 | 465 | 555 | A Chain A, L-rhamnulose-1-phosphate Aldolase From Escherichia Coli ( Mutant E192a-k248w-a273s) |
| PDB | 3rj0_A | 0.000000007 | 412 | 513 | 386 | 483 | A Chain A, L-rhamnulose-1-phosphate Aldolase From Escherichia Coli ( Mutant E192a-k248w-a273s) |
| PDB | 3rj0_A | 0.000000009 | 433 | 514 | 451 | 532 | A Chain A, L-rhamnulose-1-phosphate Aldolase From Escherichia Coli ( Mutant E192a-k248w-a273s) |
| PDB | 3rj0_A | 0.0002 | 440 | 510 | 192 | 261 | A Chain A, L-rhamnulose-1-phosphate Aldolase From Escherichia Coli ( Mutant E192a-k248w-a273s) |
