| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s6_364V6.1 |
| Family | CBM57 |
| Protein Properties | Length: 501 Molecular Weight: 53899.8 Isoelectric Point: 5.1056 |
| Chromosome | Chromosome/Scaffold: 6 Start: 2918801 End: 2922479 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 224 | 363 | 4.9e-22 |
| DRHWATDQDLFVSGCAGEAIHTLARISNFGNPPNVYPEAIYQSATTIGTTSKLSYTVSVQPNQNYSVWLHFAEIHPWITGPNMRVFDVMANGALLFQGID IVKIVGEPFKALTLNKTVMVTSSNLTISFVAVKGPVAVNA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 501 Download |
| MDITGAAFVV MAAIICSVFG IPFTAAENEG PFEVRIACGS TVDSVALETG YNWSKDRGYT 60 GGSSAPLNVT NRIAPQLNTL RYFEITDGPD NCYNISVPSG HYLVRFFFSF GAEDNGGREP 120 IFEVSLEGTL VHSLAPGWSS IDSNAYAESL LHITDGAATV CFHSAGHGNP AIASLEILQL 180 YVDAYNMGSS ANLNVVMRTV KRVSAGAEES GFGSRVRGDE WGGDRHWATD QDLFVSGCAG 240 EAIHTLARIS NFGNPPNVYP EAIYQSATTI GTTSKLSYTV SVQPNQNYSV WLHFAEIHPW 300 ITGPNMRVFD VMANGALLFQ GIDIVKIVGE PFKALTLNKT VMVTSSNLTI SFVAVKGPVA 360 VNALEVFQII PRGYETQDET VWALHDIKHS LQLPSRLGWN GDPCAPPLHP WEGVSCAFDS 420 KAGAWFVSAV NLNNEGLRGQ IGDTWPALRK LQALNLSNNF LEGEISSFGN MTSLTSLDLS 480 HNRLSGLVPA SLGKLTLKIL * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.0004 | 34 | 172 | 163 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 2.0e-9 | 430 | 495 | 67 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 2.0e-15 | 256 | 361 | 108 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 5.0e-59 | 36 | 369 | 353 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 23 | 500 | 483 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF16758.1 | 0 | 31 | 500 | 26 | 498 | AC010155_11 F3M18.23 [Arabidopsis thaliana] |
| RefSeq | NP_001059721.1 | 0 | 23 | 500 | 27 | 508 | Os07g0501800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_174156.1 | 0 | 31 | 500 | 26 | 498 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_001752825.1 | 0 | 31 | 500 | 1 | 470 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002462899.1 | 0 | 31 | 497 | 37 | 506 | hypothetical protein SORBIDRAFT_02g034070 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hq1_A | 0.002 | 378 | 490 | 322 | 428 | A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase |
| PDB | 3rj0_A | 0.003 | 426 | 489 | 654 | 718 | A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase |
