| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00022923m |
| Family | CBM57 |
| Protein Properties | Length: 626 Molecular Weight: 68678.1 Isoelectric Point: 6.8406 |
| Chromosome | Chromosome/Scaffold: 002737 Start: 10490 End: 15683 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 214 | 371 | 7.4e-26 |
| GKPAFDEDLHGISWGGDRFWLGLQTLSSSSDDQSISTENVIAETLLAPNFYPQSLYQSAIVGTDRQPSLSFEMDVTPNKNYSVWLHFAEIDNGVTAEEQR VFDVLINGDTAFKDVDIIRMTGERFTALVLNKTVAVSGTTLKIILQPVKGTRSIISAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 626 Download |
| MRQRSPAVLQ LRLWLLAVSV WPAFLGVLAA DLSKEPFTIR ISCGSFDDVR TSPTNTLWYR 60 DFGYTGGRFA NATRPSFIIP PLKTLRYFPL SDGPENCYNI NNVPNGHYQV RLFFGLLDNP 120 NLDSEPIFDV SVEGTLFSSL LLGWSSDDEK TFAEALVFVQ DSSLSVCFHS TGHGDPSILS 180 IEVLQIDDDS YNFSPSWGKG TVLRTAKRLK CGSGKPAFDE DLHGISWGGD RFWLGLQTLS 240 SSSDDQSIST ENVIAETLLA PNFYPQSLYQ SAIVGTDRQP SLSFEMDVTP NKNYSVWLHF 300 AEIDNGVTAE EQRVFDVLIN GDTAFKDVDI IRMTGERFTA LVLNKTVAVS GTTLKIILQP 360 VKGTRSIISA IEVFEVIPAE KKTLPQEVSA LRTLKGSLGL PLRFGWNGDP CVPQQHPWSG 420 VDCQFDNNKG NWIIDGLGLD NQGLRGVIPG DISKLQHLQS INLSGNSIKG NIPTSIGTIS 480 ALQVLDLSYN ELNGSIPESL GLLTSLQILN LNGNRLSGRV PANLGGRPLH RARFNFTDNA 540 GLCGIPGLRE CGPHLSVAAK IGMAFGVLLA ILFLVVFAAC WWKRRQSILR AQKLAAAREA 600 PYAKSRTQFT RDVQMTKHQR PSESS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 9.0e-14 | 437 | 521 | 85 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 6.0e-14 | 437 | 526 | 90 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-14 | 437 | 525 | 89 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam12819 | Malectin_like | 9.0e-68 | 41 | 376 | 354 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 11 | 625 | 615 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 36 | 617 | 24 | 605 | unnamed protein product [Vitis vinifera] |
| GenBank | EAZ39920.1 | 0 | 23 | 625 | 22 | 579 | hypothetical protein OsJ_24359 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059721.1 | 0 | 23 | 625 | 22 | 624 | Os07g0501800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002279791.1 | 0 | 39 | 617 | 1 | 581 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002462899.1 | 0 | 1 | 624 | 1 | 625 | hypothetical protein SORBIDRAFT_02g034070 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.00000000000003 | 409 | 553 | 611 | 750 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3rgz_A | 0.000000004 | 437 | 524 | 399 | 486 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3rgz_A | 0.00000004 | 434 | 522 | 468 | 556 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3rgz_A | 0.0000002 | 444 | 525 | 454 | 535 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3rgz_A | 0.00001 | 431 | 500 | 493 | 558 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
