| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G10560.1 |
| Family | GH3 |
| Protein Properties | Length: 793 Molecular Weight: 87185 Isoelectric Point: 6.3338 |
| Chromosome | Chromosome/Scaffold: 5 Start: 3336255 End: 3339366 |
| Description | glycosyl hydrolase family 3 protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH3 | 74 | 342 | 0 |
| ASVPRLGIPPYEWWSESLHGLADNGPGVSFNGSISAATSFPQVIVSAASFNRTLWYEIGSAVAVEGRAMYNGGQAGLTFWAPNINVFRDPRWGRGQETPG EDPKVVSEYGVEFVRGFQEKKKRKVLKRRFSDDVDDDRHDDDADGKLMLSACCKHFTAYDLEKWGNFTRYDFNAVVTEQDMEDTYQPPFETCIRDGKASC LMCSYNAVNGVPACAQGDLLQKARVEWGFEGYITSDCDAVATIFAYQGYTKSPEEAVADAIKAGVDINC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 793 Download |
| MNLQLTLISL LFFTSAIAET FKNLDSHPQF PCKPPHFSSY PFCNVSLSIK QRAISLVSLL 60 MLPEKIGQLS NTAASVPRLG IPPYEWWSES LHGLADNGPG VSFNGSISAA TSFPQVIVSA 120 ASFNRTLWYE IGSAVAVEGR AMYNGGQAGL TFWAPNINVF RDPRWGRGQE TPGEDPKVVS 180 EYGVEFVRGF QEKKKRKVLK RRFSDDVDDD RHDDDADGKL MLSACCKHFT AYDLEKWGNF 240 TRYDFNAVVT EQDMEDTYQP PFETCIRDGK ASCLMCSYNA VNGVPACAQG DLLQKARVEW 300 GFEGYITSDC DAVATIFAYQ GYTKSPEEAV ADAIKAGVDI NCGTYMLRHT QSAIEQGKVS 360 EELVDRALLN LFAVQLRLGL FDGDPRRGQY GKLGSNDICS SDHRKLALEA TRQGIVLLKN 420 DHKLLPLNKN HVSSLAIVGP MANNISNMGG TYTGKPCQRK TLFTELLEYV KKTSYASGCS 480 DVSCDSDTGF GEAVAIAKGA DFVIVVAGLD LSQETEDKDR VSLSLPGKQK DLVSHVAAVS 540 KKPVILVLTG GGPVDVTFAK NDPRIGSIIW IGYPGETGGQ ALAEIIFGDF NPGGRLPTTW 600 YPESFTDVAM SDMHMRANSS RGYPGRTYRF YTGPQVYSFG TGLSYTKFEY KILSAPIRLS 660 LSELLPQQSS HKKQLQHGEE LRYLQLDDVI VNSCESLRFN VRVHVSNTGE IDGSHVVMLF 720 SKMPPVLSGV PEKQLIGYDR VHVRSNEMME TVFVIDPCKQ LSVANDVGKR VIPLGSHVLF 780 LGDLQHSLSV EF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 1.0e-55 | 73 | 453 | 387 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-59 | 415 | 646 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-61 | 56 | 367 | 320 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 3.0e-78 | 111 | 757 | 694 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 1 | 792 | 794 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005773 | vacuole |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009044 | xylan 1,4-beta-xylosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC41913.1 | 0 | 61 | 792 | 1 | 732 | putative beta-xylosidase [Arabidopsis thaliana] |
| EMBL | CBI25718.1 | 0 | 26 | 792 | 26 | 768 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_196618.1 | 0 | 1 | 792 | 1 | 792 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002264031.1 | 0 | 1 | 792 | 1 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299457.1 | 0 | 26 | 792 | 26 | 779 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 111 | 757 | 91 | 698 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
| PDB | 3u48_A | 0 | 111 | 757 | 91 | 698 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
| PDB | 3u4a_B | 0 | 111 | 757 | 91 | 698 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
| PDB | 3u4a_A | 0 | 111 | 757 | 91 | 698 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
| PDB | 2x41_A | 1e-39 | 76 | 765 | 46 | 683 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-beta-xylosidase |
