Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr7g109390.1 |
Family | GH3 |
Protein Properties | Length: 772 Molecular Weight: 82830.8 Isoelectric Point: 8.8301 |
Chromosome | Chromosome/Scaffold: 7 Start: 34662737 End: 34670172 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 75 | 321 | 0 |
AVPRVGMKSYEWWSEALHGVSNVGPGTRFGGVFPAATSFPQVITTAASFNASLWEAIGRVVSDEARAMYNGGAAGLTYWSPNVNIFRDPRWGRGQETPGE DPVLAGRYAASYVKGLQGTDGNKLKVAACCKHFTAYDVDNWNGVDRFHFNALVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLKKT VRGVWGLDGYIVSDCDSVGVLYNSQHYTSTPEEAAADAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 772 Download |
MSSTFSLSPL ITLFILLLQS SCDARDSFAC DAKDAATKNL PFCNVKLAIP ERVKDLIGRL 60 TMQEKVNLLV NNAPAVPRVG MKSYEWWSEA LHGVSNVGPG TRFGGVFPAA TSFPQVITTA 120 ASFNASLWEA IGRVVSDEAR AMYNGGAAGL TYWSPNVNIF RDPRWGRGQE TPGEDPVLAG 180 RYAASYVKGL QGTDGNKLKV AACCKHFTAY DVDNWNGVDR FHFNALVSKQ DIEDTFDVPF 240 RMCVKEGKVA SVMCSYNQVN GVPTCADPNL LKKTVRGVWG LDGYIVSDCD SVGVLYNSQH 300 YTSTPEEAAA DAIKAGLDLD CGPFLGVHTQ DAVKKGLLTE ADVNNALVNT LKVQMRLGMF 360 DGEPSAQAYG RLGPKDVCKP AHQELALEAA RQGIVLLKNT GPTLPLSPQR HRTVAVIGPN 420 SDVTVTMIGN YAGIACGYTS PLQGIGRYAK TIHQQGCSNV ACRDDKQFGP ALDAARHADA 480 TILVIGLDQS IEAETVDRTS LLLPGHQQDL VSKVAAASKG PTILVLMSGG PVDITFAKND 540 PKVAGILWAG YPGQAGGAAI ADILFGTASP GGKLPVTWYP QEYLKNLAMT NMAMRPSKIG 600 YPGRTYRFYK GPVVYPFGHG LTYTHFVHEL SSAPTVVSVP VHGHRHGNNT NISNKAIRVT 660 HARCGKLSIA LHVDVKNVGS RDGTHTLLVF SAPPNGGNHW VPQKSLVAFE KVHVPAKTKQ 720 RVRVNIHVCK LLSVVDKSGI RRIPMGEHSL HIGDVKHSVS LQAEALGIIK S* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 9.0e-58 | 87 | 458 | 378 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-64 | 394 | 624 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 2.0e-64 | 47 | 353 | 315 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 8.0e-81 | 111 | 726 | 674 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 23 | 763 | 764 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 11 | 771 | 6 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 11 | 771 | 11 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 2 | 771 | 3 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316021.1 | 0 | 23 | 771 | 23 | 768 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 19 | 771 | 19 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 111 | 726 | 91 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 3u48_A | 0 | 111 | 726 | 91 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 3u4a_B | 0 | 111 | 726 | 91 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 3u4a_A | 0 | 111 | 726 | 91 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 2x41_A | 0 | 51 | 762 | 2 | 708 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |