Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G143600.1 |
Family | GH3 |
Protein Properties | Length: 798 Molecular Weight: 86046.5 Isoelectric Point: 9.107 |
Chromosome | Chromosome/Scaffold: 01 Start: 19537336 End: 19541597 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 101 | 348 | 0 |
AAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGAFPGATSFPQVITTAASFNATLWEAIGRVVSDEARAMYNGGAAGLTYWSPNVNIFRDPRWGRGQETPG EDPVLAGTYAASYVKGLQGNNGDRLKVAACCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFKMCVQDGNVASVMCSYNQVNGVPTCADPNLLKR TIRGQWNLNGYIVSDCDSVGVFYNTQHYTSTPEEAAADAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 798 Download |
MPYILLLFQY HYKYPHWSVS QMKTGIATTT MASLPQTIIL FLLLLGAFAQ ARDPFACDSK 60 DAKTSSLPFC KVSMPIPNRV TDLLGRLTMQ EKVRLLVNNA AAVPRLGIKG YEWWSEALHG 120 VSNVGPGTKF GGAFPGATSF PQVITTAASF NATLWEAIGR VVSDEARAMY NGGAAGLTYW 180 SPNVNIFRDP RWGRGQETPG EDPVLAGTYA ASYVKGLQGN NGDRLKVAAC CKHFTAYDLD 240 NWNGVDRFHF NAKVSKQDIE DTFDVPFKMC VQDGNVASVM CSYNQVNGVP TCADPNLLKR 300 TIRGQWNLNG YIVSDCDSVG VFYNTQHYTS TPEEAAADAI KAGLDLDCGP FLAQYTENAV 360 TRGLLKEADV NSALANTLTV QMRLGMFDGE PSTQPFGNLG PKDVCTPAHQ ELALEAARQG 420 IVLLNNRGPS LPLSHLRHRT VAVIGPNSNA TVTMIGNYAG VACAYTSPLQ GIGNYAKTIH 480 QMGCADVACN DDKLFSGAIN AARQADATVL VMGLDQSIEA EFRDRTGLLL PGRQQELVSK 540 VAMASKGQTI LVLMSGGPID VSFAKNDPRI GAILWAGYPG QAGGAAIADV LYGTTNPEGK 600 LPMTWYPQEY VSNLPMTDMA MRSSANRNYP GRTYKFYKGP VVYPFGHGLS YTNFVHTIAS 660 APKVVTVPLD GHRHSGNATI SGKAIKVNHV RCNKLSVGLQ VDVKNTGSKD GTHTMLVFSK 720 PPAGHWAPQK QLVAFAKVLV PARSQRRVGI NIHVCKFLSV VDRSGVRRIP TGVHNLHIGG 780 IKHPLSLQPA TLGVIKS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-58 | 421 | 652 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 3.0e-59 | 98 | 484 | 393 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-62 | 91 | 380 | 294 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 6.0e-80 | 138 | 752 | 671 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 46 | 788 | 766 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 38 | 797 | 6 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 38 | 797 | 11 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 27 | 797 | 3 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316021.1 | 0 | 48 | 797 | 21 | 768 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 51 | 797 | 24 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 138 | 752 | 91 | 696 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3u48_A | 0 | 138 | 752 | 91 | 696 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3u4a_B | 0 | 138 | 752 | 91 | 696 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3u4a_A | 0 | 138 | 752 | 91 | 696 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 2x41_A | 3e-40 | 78 | 788 | 2 | 708 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY274096 | 315 | 224 | 538 | 0 |
DY291330 | 352 | 444 | 795 | 0 |
BX838810 | 332 | 31 | 362 | 0 |
DW494803 | 284 | 9 | 292 | 0 |
FC889191 | 308 | 224 | 531 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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