Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G00654.1 |
Family | GH3 |
Protein Properties | Length: 622 Molecular Weight: 67088.9 Isoelectric Point: 5.4503 |
Chromosome | Chromosome/Scaffold: 7 Start: 11362173 End: 11364853 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 8 | 183 | 0 |
GLTFWSPNVNIFRDPRWGRGQETPGEDPLLSSKYASGYVRGLQQSDDGNADRLKVAACCKHYTAYDIEDWKGVDRYHINTVVTQQDLEDTFQPPFKSCIL DGNVACVMCSYNQVNGKPTCADPDFLAGIIRGKWKLNGYIASDCDSVYEFYNSQNYTKTLEEAAAKAILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 622 Download |
MHNVGLAGLT FWSPNVNIFR DPRWGRGQET PGEDPLLSSK YASGYVRGLQ QSDDGNADRL 60 KVAACCKHYT AYDIEDWKGV DRYHINTVVT QQDLEDTFQP PFKSCILDGN VACVMCSYNQ 120 VNGKPTCADP DFLAGIIRGK WKLNGYIASD CDSVYEFYNS QNYTKTLEEA AAKAILAGLD 180 LNCGYVLVQH TEAAVRGGLL DESAIDKAIS NNFATLMRLS FFDGDPRKQL YGKLGPDHVC 240 TPSNQELARE AARQGIVLLK NNAGSLPLSS TTIKSLAVIG PNANVTTTMI GNYEGIPCKY 300 VTPLQGLAAV VSTTYVAGCA DVGCGLAQTD DAKKVAASAD ATVLVMGADQ SIERENLDRV 360 DLNLPGQQSL LVSEVANVSK GPVILVIMSG GGMDVSFAKD NDKITSILWV GYPGEAGGAA 420 MADLIFGDHN PSGRLPMTWY PQSYADTVPM TNMTMRPDPA MGYPGRTYRF YTGPTLYSFG 480 DGLSYSSFNH SLVQAPRVMS VPLEEGHVCR SSACESLEAT GETCSNLTFD VHLNVKNVGN 540 FSGSHTVFLF SSPPSVHRAP QKQLLGFEKV FLASQSEAQV QFKVDVCKDL SVVDELGHRK 600 VALGMYVLHV GDLKHALSVQ I* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 1.0e-45 | 12 | 319 | 312 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-46 | 12 | 211 | 203 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-53 | 256 | 486 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-65 | 12 | 586 | 623 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 621 | 641 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 1 | 621 | 154 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 1 | 621 | 346 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 1 | 621 | 148 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 1 | 621 | 119 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 1 | 621 | 156 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 12 | 584 | 128 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u48_A | 0 | 12 | 584 | 128 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u4a_B | 0 | 12 | 584 | 128 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u4a_A | 0 | 12 | 584 | 128 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 2x41_A | 2e-29 | 13 | 491 | 117 | 606 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO798199 | 392 | 232 | 614 | 0 |
EC924436 | 304 | 318 | 621 | 0 |
EL371570 | 285 | 9 | 293 | 0 |
DT556104 | 292 | 77 | 368 | 0 |
GR994746 | 284 | 205 | 488 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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