Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g106860.1 |
Family | GH3 |
Protein Properties | Length: 782 Molecular Weight: 85384.3 Isoelectric Point: 7.2329 |
Chromosome | Chromosome/Scaffold: 1 Start: 31473476 End: 31477199 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 71 | 323 | 0 |
GISRLGVPAYEWWSEALHGVSNVGPGTRFDSRVPGATSFPAVILSAASFNETLWYTMGQVVSNEARAMYNVDLAGLTFWSPNVNVFRDPRWGRGQETPGE DPLVVSRYAVNYVRGLQEVGDEASAKGDRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQDLEDTYQPPFKSCVLEGHVSSVMCSYNRVNGIPTCADP DLLQGVIRGQWGLDGYIVSDCDSVEVYYNSIHYTKTPEDAVALALKAGLNMNC |
Full Sequence |
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Protein Sequence Length: 782 Download |
MKNHLLFLCI FFSFFILPIT SQKHACDKGS PKTSNFPFCN TSLSYETRAK DLVSRLTLQE 60 KAQQLVNPST GISRLGVPAY EWWSEALHGV SNVGPGTRFD SRVPGATSFP AVILSAASFN 120 ETLWYTMGQV VSNEARAMYN VDLAGLTFWS PNVNVFRDPR WGRGQETPGE DPLVVSRYAV 180 NYVRGLQEVG DEASAKGDRL KVSSCCKHYT AYDVDNWKGV DRFHFDAKVT KQDLEDTYQP 240 PFKSCVLEGH VSSVMCSYNR VNGIPTCADP DLLQGVIRGQ WGLDGYIVSD CDSVEVYYNS 300 IHYTKTPEDA VALALKAGLN MNCGDFLKKY TANAVNLKKV DVSIVDQALV YNYIVLMRLG 360 FFENPKSLPF ANLGPSDVCT KENQQLALEA AKQGIVLLEN NKGALPLSKT KIKNLAVIGP 420 NANATTVMIS NYAGIPCRYS SPLQGLQKYI SSVTYARGCS DVKCSNQNLF AAAVKAAASA 480 DAVVLVVGLD QSIEAEGLDR VNLTLPGFQE KLVKDVAAAT KGTLILVIMA AGPIDISFTK 540 SVSNIGGILW VGYPGQDGGN AIAQVIFGDY NPGGRSPFTW YPQSYVDQVP MTDMNMRANS 600 SRNFPGRTYR FYNGKSLYEF GYGLSYSTFS THIASAPSTI MLQKNTSISK PLNNIFLDDQ 660 VIDISTISCF NLTFSLVIGV KNNGPFDGSH VVLVFLEPPS SEAVSGVPLK QLIGFERAQV 720 KVGKTEFVTV KIDICKMLSN VDSDGKRKLV IGQHNILVGT SSEKQVTHHI DITNGEEFMS 780 E* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-54 | 395 | 628 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 8.0e-60 | 71 | 423 | 360 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 5.0e-64 | 57 | 348 | 321 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-75 | 58 | 764 | 753 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 30 | 759 | 740 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02547.1 | 0 | 21 | 772 | 23 | 771 | beta-1,4-xylosidase [Arabidopsis thaliana] |
EMBL | CAN82161.1 | 0 | 2 | 772 | 3 | 784 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_188596.1 | 0 | 21 | 772 | 23 | 771 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264114.1 | 0 | 2 | 771 | 27 | 807 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002527511.1 | 0 | 16 | 772 | 17 | 782 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 107 | 779 | 91 | 742 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3u48_A | 0 | 107 | 779 | 91 | 742 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3u4a_B | 0 | 107 | 779 | 91 | 742 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3u4a_A | 0 | 107 | 779 | 91 | 742 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 2x41_A | 7e-39 | 48 | 762 | 3 | 702 | A Chain A, The Structure Of Soybean Peroxidase |