Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra021962 |
Family | GH14 |
Protein Properties | Length: 653 Molecular Weight: 73630.9 Isoelectric Point: 6.1771 |
Chromosome | Chromosome/Scaffold: 02 Start: 17929594 End: 17932500 |
Description | beta-amylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 200 | 600 | 0 |
YAMLPVGVIDNFGQLVDPQGVRQELSYMKSLNVDGVVIDCWWGIVEGWNPQKYVWSGYRELFNLIRDFKLKLQVVMAFHEYGGNASGNVMISLPQWVLEI GKDNPDIFFTDREGRRSFECLNWSIDKERVLHGRTGIEVYFDFMRSFRSEFDDLFVEGLIAGIEIGLGASGELKYPSFPERMGWIYPGIGEFQCYDKYSQ TSLLKEAKSRGFAFWGKGPENAGQYNSQPHETGFFQERGEYDSYYGRFFLNWYSQLLIGHAENVLSLANLAFEETKIIVKIPAIYWSYKIASHAAELTAG YYNPSNRDGYSPVFETLKKYSVTVKFVCPGPQMSSNEHEEALADPEGLSWQVVNAAWDKGLLIGGENAITCFDRGGCMRLIEMAKPRNHPDSNHFSFFTY R |
Full Sequence |
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Protein Sequence Length: 653 Download |
MGQADSDVNN GNITGETSSG GGGGKGKRER EKEKERTKLR ERHRRAITSR MLAGLRQYGN 60 FPLPARADMN DVIAALAREA GWSVDADGTT YRQSHQTNHV VQFPARSIDN PLSSSTLKNC 120 AKAALECQQQ HPSLRIDDNL SPVSLDSVVI AESDHPGNGR YTGASPIPSV GCVDANQLIQ 180 DVHSTERRND YTENFYVPVY AMLPVGVIDN FGQLVDPQGV RQELSYMKSL NVDGVVIDCW 240 WGIVEGWNPQ KYVWSGYREL FNLIRDFKLK LQVVMAFHEY GGNASGNVMI SLPQWVLEIG 300 KDNPDIFFTD REGRRSFECL NWSIDKERVL HGRTGIEVYF DFMRSFRSEF DDLFVEGLIA 360 GIEIGLGASG ELKYPSFPER MGWIYPGIGE FQCYDKYSQT SLLKEAKSRG FAFWGKGPEN 420 AGQYNSQPHE TGFFQERGEY DSYYGRFFLN WYSQLLIGHA ENVLSLANLA FEETKIIVKI 480 PAIYWSYKIA SHAAELTAGY YNPSNRDGYS PVFETLKKYS VTVKFVCPGP QMSSNEHEEA 540 LADPEGLSWQ VVNAAWDKGL LIGGENAITC FDRGGCMRLI EMAKPRNHPD SNHFSFFTYR 600 QPSPLVQGST CFADLDYFIK RMHGEVYMHL QSIAHVYIAN LLFLRFIVCF CR* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 1.0e-99 | 197 | 572 | 382 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 9.0e-114 | 197 | 622 | 432 | + beta-amylase | ||
PLN02801 | PLN02801 | 9.0e-136 | 190 | 625 | 446 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 46 | 626 | 581 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 46 | 631 | 608 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29216.1 | 0 | 37 | 630 | 19 | 610 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001032014.1 | 0 | 1 | 626 | 53 | 682 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | NP_199343.1 | 0 | 1 | 626 | 53 | 684 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002270680.1 | 0 | 30 | 630 | 70 | 668 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304400.1 | 0 | 37 | 625 | 86 | 667 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdq_A | 0 | 196 | 625 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byd_A | 0 | 196 | 625 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byc_A | 0 | 196 | 625 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byb_A | 0 | 196 | 625 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1bya_A | 0 | 196 | 625 | 11 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |