Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G230100.3 |
Family | GH14 |
Protein Properties | Length: 422 Molecular Weight: 47799 Isoelectric Point: 7.594 |
Chromosome | Chromosome/Scaffold: 08 Start: 51641300 End: 51644003 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 1 | 379 | 0 |
MVDAWWGLVEKDGPLNYNWEGYTELVKMVEKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNQDLVYTDRLGRRNPEYISLGCDSVPVLRGRTP IQAYTDYMRSFRERFRDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWKFPGIGEFQCHDKYMRASLEAAAEAIGQKDWGKGGPHDSGHYKQVPEETGFF KRDGTWNTEYGQFFLEWYSRKLLEHGDRILAAAKGTFHGTGAKLSAKVAGIHWHYRTRSHAAELTAGYYNTRHHDGYLPIAQMFSKHGVVFNFTCMEMRD GEQPEYANCSPEGLVRQVKMATKIARVELAGENALERYDAGSYAQVLATSRSDSGNGLSAFTYLRMNKRLFEGDNWRHL |
Full Sequence |
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Protein Sequence Length: 422 Download |
MVDAWWGLVE KDGPLNYNWE GYTELVKMVE KHGLKLQVVM SFHQCGGNVG DSCSIPLPPW 60 VLEEISKNQD LVYTDRLGRR NPEYISLGCD SVPVLRGRTP IQAYTDYMRS FRERFRDYLG 120 RVIVEIQVGM GPCGELRYPS YPESNGTWKF PGIGEFQCHD KYMRASLEAA AEAIGQKDWG 180 KGGPHDSGHY KQVPEETGFF KRDGTWNTEY GQFFLEWYSR KLLEHGDRIL AAAKGTFHGT 240 GAKLSAKVAG IHWHYRTRSH AAELTAGYYN TRHHDGYLPI AQMFSKHGVV FNFTCMEMRD 300 GEQPEYANCS PEGLVRQVKM ATKIARVELA GENALERYDA GSYAQVLATS RSDSGNGLSA 360 FTYLRMNKRL FEGDNWRHLV EFVKNMSEGG RKISECDSRG TNLYIGFIKD KTVEKKEVAL 420 V* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 1.0e-134 | 1 | 386 | 393 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 5.0e-162 | 1 | 382 | 395 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02801 | PLN02801 | 8.0e-170 | 1 | 386 | 394 | + beta-amylase | ||
PLN02803 | PLN02803 | 0 | 1 | 421 | 424 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 1 | 389 | 395 | + beta-amylase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62440.1 | 0 | 1 | 421 | 120 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 421 | 120 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 421 | 124 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 421 | 125 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 421 | 124 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 1 | 386 | 51 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1q6c_A | 0 | 1 | 386 | 51 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 1 | 386 | 51 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1uko_D | 0 | 1 | 386 | 51 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 1 | 386 | 51 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794833 | 411 | 1 | 409 | 0 |
BU103692 | 418 | 1 | 416 | 0 |
CO087014 | 299 | 60 | 358 | 0 |
ES830803 | 380 | 1 | 377 | 0 |
HO825836 | 386 | 36 | 419 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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