Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10019360m |
Family | GH14 |
Protein Properties | Length: 610 Molecular Weight: 68925.9 Isoelectric Point: 8.9046 |
Chromosome | Chromosome/Scaffold: 3 Start: 693336 End: 696610 |
Description | beta-amylase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 147 | 568 | 0 |
FVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEE IDKDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITGVQVGMGPAGELRYPSLPSQKLMWSWRSRELGEFQCYDKY MLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHP SELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKP SFSFNFLRMDKNMFEYHNWVRF |
Full Sequence |
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Protein Sequence Length: 610 Download |
MLYCNPISPQ QKCDCSCSTP SFIPLTNSHV LFLFAFSFLP PPLALSSKFL QKHFNSILIR 60 KPNPNIKTMA IATFAPSFCC TRTEPTQLPR FRLTHSHKLQ SQTRRLSVSC RLNSSNSLSP 120 ADNNNNNRYK LHDGASSQGR RNGSPVFVKL PEDSTMIGGK VKRRKAMAQS FKALAAAGVE 180 GVVVEVWWGV VERDRPGVYD WRGYFDLIVL ASNCGLKVRA LLAFHQCGSG PGDPKWVPLP 240 QWVLEEIDKD PDLAYSDRFG RRNMEYISLG CDILPVLRGR SPIQAYTDFM RNFRDTFRPL 300 LGAIITGVQV GMGPAGELRY PSLPSQKLMW SWRSRELGEF QCYDKYMLAS LNACAREIGM 360 REWGDGGPIG ASNLMQDPEH TEFFRTDNGL WNTAYGNFFL EWYSGMLLLH GERICREAET 420 IFRGTRVNTS AKVGGIHWHY GTPSHPSELT AGYYNTSTRD GFLPIARIFG RYGFTLCCSC 480 FEMRDVDEKQ MNPFSSPEGF LRQLLLAARI CEIPLEGENS ATSLDDAAFQ QVIKMSKFYS 540 EGLEKPSFSF NFLRMDKNMF EYHNWVRFTR FVRQLSGSSI FRAKLDFRGD IRPSSASDFA 600 KVGLAFAYC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 1.0e-88 | 196 | 580 | 388 | + beta-amylase | ||
PLN02161 | PLN02161 | 1.0e-94 | 145 | 576 | 442 | + beta-amylase | ||
PLN02801 | PLN02801 | 2.0e-111 | 196 | 575 | 387 | + beta-amylase | ||
PLN00197 | PLN00197 | 5.0e-170 | 106 | 575 | 472 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 8.0e-173 | 130 | 576 | 449 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN65860.1 | 0 | 66 | 608 | 3 | 542 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002263816.1 | 0 | 34 | 608 | 58 | 631 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297961.1 | 0 | 69 | 609 | 1 | 555 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304568.1 | 0 | 140 | 576 | 1 | 437 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002454872.1 | 0 | 167 | 588 | 1 | 420 | hypothetical protein SORBIDRAFT_03g000480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 146 | 575 | 15 | 443 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1b1y_A | 0 | 146 | 578 | 8 | 438 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgi_A | 0 | 146 | 575 | 12 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgb_A | 0 | 146 | 575 | 12 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xg9_A | 0 | 146 | 575 | 12 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY276904 | 402 | 51 | 446 | 0 |
DY263387 | 372 | 51 | 416 | 0 |
DY286654 | 312 | 51 | 362 | 0 |
FC911946 | 299 | 51 | 349 | 0 |
DY286654 | 34 | 366 | 399 | 0.035 |
Sequence Alignments (This image is cropped. Click for full image.) |
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