Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10019566m |
Family | GH14 |
Protein Properties | Length: 552 Molecular Weight: 61987.3 Isoelectric Point: 8.8407 |
Chromosome | Chromosome/Scaffold: 3 Start: 4633466 End: 4637016 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 92 | 506 | 0 |
FVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEE ISKNPDLVYTDKSGRRNPEYISLGCDTIPLLRGRTPIQVYSDYMRSFRDRFRDYLGDVVQEIQVGLGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMR ASLKASAEASSNEDWGRSGPHDSGQYNQFPEDTGFFRRDGTWNSEYGRFFMEWYSGKLIQHGDRILAAAKEIFQGTGSKLSGKVAGIHWHYRSRSHAAEL TAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATSNLDAGNGLGAFTYL RMHKKLFESDNWRNL |
Full Sequence |
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Protein Sequence Length: 552 Download |
MALTLRSSTS FINLNDTKTI KTPDEFSSPT TCFAKIKPSR RLRAKSSMQE AQLCRDKHST 60 MGGIIRKSEK REMVHELASP PHNHHRNKVP VFVMLPLDTL SNSGHLNKPR AMNASLMALK 120 SAGVEGVMVD AWWGLVEKDG PLNYNWEGYA ELIQMVKKHG LKLQVVMSFH QCGGNVGDSC 180 TIPLPPWVLE EISKNPDLVY TDKSGRRNPE YISLGCDTIP LLRGRTPIQV YSDYMRSFRD 240 RFRDYLGDVV QEIQVGLGPC GELRYPAYPE SNGTWKFPGI GEFQCYDKYM RASLKASAEA 300 SSNEDWGRSG PHDSGQYNQF PEDTGFFRRD GTWNSEYGRF FMEWYSGKLI QHGDRILAAA 360 KEIFQGTGSK LSGKVAGIHW HYRSRSHAAE LTAGYYNTRY CDGYIPIARM LAKHGAILNF 420 TCMEMRDREQ PGNANCSPEG LVQQVKMATR TAGVELAGEN ALERYDADAY AQVLATSNLD 480 AGNGLGAFTY LRMHKKLFES DNWRNLVEFV QRMSSEGRRP RLPEWDSTGS DLYVGFVKGK 540 NGKKTKEAAV V* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 5.0e-151 | 21 | 516 | 516 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 1.0e-171 | 92 | 509 | 429 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 551 | 552 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 89 | 520 | 438 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 87 | 513 | 435 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62440.1 | 0 | 1 | 551 | 1 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 551 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 551 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 551 | 1 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 551 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 78 | 516 | 1 | 444 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1q6c_A | 0 | 78 | 516 | 1 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 78 | 516 | 1 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1uko_D | 0 | 78 | 516 | 1 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 78 | 516 | 1 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103692 | 548 | 1 | 544 | 0 |
HO794833 | 426 | 127 | 552 | 0 |
HO781538 | 405 | 33 | 436 | 0 |
HO825836 | 382 | 163 | 544 | 0 |
DV161367 | 302 | 123 | 424 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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