Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10004620m |
Family | GH14 |
Protein Properties | Length: 581 Molecular Weight: 64514.4 Isoelectric Point: 6.2346 |
Chromosome | Chromosome/Scaffold: 9 Start: 7579900 End: 7583093 |
Description | beta-amylase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 121 | 536 | 0 |
FVMMPLDSVTMSNTVNRKKAMDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVSIPLPKWVVEE VDKDQDLVYTDQWGMRNYEYISLGCDTIPVLKGRMPVQCYSDFMRAFKDKFKDLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYML SSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPE LTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQILRAASLDVDKQMCAFTY LRMNPHLFQPDNWRQF |
Full Sequence |
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Protein Sequence Length: 581 Download |
MALNLTHQIG TLAGTPIQMD TGVVSGDSTG TVNASAVWKP VSTDLRCAIQ KPDLKDTMSP 60 PVSPCRSPVL SSMRADLSVA CRAFATESPT AAAVTEFSEE VGGEMYKQGG LQEKGNGVPV 120 FVMMPLDSVT MSNTVNRKKA MDASLRALKS AGVEGVMMDV WWGLVERDQP GHYNWGGYSD 180 LLEMAKRHGL KVQAVMSFHQ CGGNVGDSVS IPLPKWVVEE VDKDQDLVYT DQWGMRNYEY 240 ISLGCDTIPV LKGRMPVQCY SDFMRAFKDK FKDLLGDTIV EIQVGMGPAG ELRYPSYPEQ 300 NGTWKFPGIG AFQCYDKYML SSLKAAAESA GKPEWGSTGP TDAGHYNNWP EDTQFFRKEN 360 GGWCSPYGEF FLSWYSQMLL DHGERILSSA KAIFDATGVK ISVKVAGIHW HYGSRSHAPE 420 LTAGYYNTRF RDGYLPIAQM LARHGAIFNF TCIEMRDHEQ PQDALCAPEK LVKQVASATQ 480 KAHVPLAGEN ALPRYDEYAH EQILRAASLD VDKQMCAFTY LRMNPHLFQP DNWRQFVAFV 540 KKMNEGKDVH RCLEQVEREA EHFVHVTQPL VQEAAVALMH * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01373 | Glyco_hydro_14 | 9.0e-141 | 121 | 539 | 430 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02161 | PLN02161 | 4.0e-145 | 118 | 544 | 437 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 1 | 580 | 585 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 57 | 546 | 490 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 115 | 548 | 442 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY89374.1 | 0 | 1 | 580 | 1 | 576 | beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae] |
EMBL | CAN71375.1 | 0 | 3 | 580 | 1 | 570 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285569.1 | 0 | 2 | 580 | 3 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311706.1 | 0 | 3 | 580 | 1 | 562 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518196.1 | 0 | 1 | 580 | 1 | 574 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 114 | 544 | 2 | 436 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1uko_D | 0 | 116 | 548 | 10 | 446 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 116 | 548 | 10 | 446 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_B | 0 | 116 | 548 | 10 | 446 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_A | 0 | 116 | 548 | 10 | 446 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779314 | 411 | 176 | 581 | 0 |
DY287950 | 377 | 78 | 450 | 0 |
DY279190 | 344 | 237 | 580 | 0 |
FC901836 | 308 | 237 | 544 | 0 |
HO798206 | 349 | 238 | 581 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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