Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra030174 |
Family | CBM57 |
Protein Properties | Length: 957 Molecular Weight: 106058 Isoelectric Point: 6.5821 |
Chromosome | Chromosome/Scaffold: 07 Start: 5934726 End: 5939837 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 372 | 540 | 2.5e-25 |
HINCGGPDVTIENSRGRFLYEGDNYGLTGSAMNYHGKNWGFSNTGDFMDDAITEDAYSISSESAKYPELYQTAQRSPLSLAYFAFCFENGSYNVKLHFAE IQFSDEEPYARLAKRFFNIYVQGKLIWEDFNIREEANGTHKEVIKEVNTTVTDNTLEIRLYWAGKGTTI |
Full Sequence |
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Protein Sequence Length: 957 Download |
MMMSQSRHFS SLLTVLIFIC LVCTVSASPS LHPDEVKALK DIASTLGVKH LNLSEDPCLT 60 KTLVITQDVL KEGHNSTIRC DCHFNNNKTC HITHFILKKF SLPGRLPPEL SKLHYLESID 120 LCLNYLYGSI PMEWASLPYL TSISVCANQL SGDIPKGLGK FINLTQLILE ANQFSGIIPK 180 ELGNLVNLEG FRFSDNQLNG SIPQFIGDLS KLKRLELYAS GLREPIPDSI FRLENLIDLR 240 ISDTTAGLGQ FPNIISKNLK YLVLRNLNLT GPIPTTIWDL PSQSHGFVSF IDLSFNRLTG 300 EIPANAVAPK YTYLAGNLLS GKIESGPFLT ASTNIDLSYN NFTWSPSCRE KTTRLLPCSA 360 ISQCQNYSKS LHINCGGPDV TIENSRGRFL YEGDNYGLTG SAMNYHGKNW GFSNTGDFMD 420 DAITEDAYSI SSESAKYPEL YQTAQRSPLS LAYFAFCFEN GSYNVKLHFA EIQFSDEEPY 480 ARLAKRFFNI YVQGKLIWED FNIREEANGT HKEVIKEVNT TVTDNTLEIR LYWAGKGTTI 540 IPKRGNYGSL ISAISVCPSS ESECGVEVTT SPVTKEHKPR TYPLILGIAA LILSLVFMIF 600 GAFYWKKCVR NADAGKRGSF SLKQLKVATD NFDPLNKIGE GGFGSVYKGR LPDGTLIAVK 660 KLSSKSCQGN KEFVNEIGMI ACLQHPNLVK LYGCCCENNQ LLLVYEYLEN NCLADALFGR 720 SGLKLEWGTR HKICVGIARG LAFLHEDSAV KIIHRDIKGT NVLLDKDLNS KISDFGLARL 780 HEDEKSHITT RVAGTIGYMA PEYAMRGYLT EKADVYSFGV VAMEIVSGKS NANYTPDNEC 840 CVGLLDWAFV LQKKGAFSEI LDPKLEGVFG GMEAERMIKV SLLCSNKSPT LRPTMSEVVK 900 MLEGETEIEQ IISDPGVYGD ELRFKQSSEI VTIPSSCESA YDLYPFSPES IAVSRQ* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00069 | Pkinase | 7.0e-49 | 637 | 829 | 197 | + Protein kinase domain. | ||
smart00220 | S_TKc | 4.0e-49 | 632 | 830 | 201 | + Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily. | ||
smart00219 | TyrKc | 1.0e-49 | 635 | 902 | 283 | + Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily. | ||
smart00221 | STYKc | 2.0e-50 | 635 | 902 | 283 | + Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. | ||
pfam11721 | Malectin | 9.0e-55 | 369 | 554 | 188 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005524 | ATP binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10621.1 | 0 | 1 | 956 | 8 | 947 | AC008030_21 Putative receptor-like serine/threonine kinase [Arabidopsis thaliana] |
GenBank | AAG50774.1 | 0 | 1 | 951 | 8 | 968 | AC079288_3 receptor protein kinase, putative [Arabidopsis thaliana] |
GenBank | AAG50775.1 | 0 | 1 | 956 | 8 | 940 | AC079288_4 receptor-like serine/threonine kinase, putative [Arabidopsis thaliana] |
RefSeq | NP_174266.2 | 0 | 1 | 956 | 8 | 969 | ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase [Arabidopsis thaliana] |
RefSeq | NP_174267.4 | 0 | 1 | 951 | 8 | 1006 | kinase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ulz_A | 0 | 615 | 905 | 15 | 309 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3uim_A | 0 | 615 | 905 | 15 | 309 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
PDB | 3tl8_H | 0 | 615 | 905 | 23 | 317 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_G | 0 | 615 | 905 | 23 | 317 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_D | 0 | 615 | 905 | 23 | 317 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |