Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A00780.1 |
Family | GH5 |
Protein Properties | Length: 470 Molecular Weight: 52338.3 Isoelectric Point: 5.0319 |
Chromosome | Chromosome/Scaffold: 1 Start: 12889551 End: 12892225 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 81 | 414 | 4.3e-34 |
DHPFYVNGFNTYWLMVFAADESTRGKVSEVFQQASAVGLTVCRTWAFNDGQWRALQKSPSVYDEVVFKALDFVVSEAKKYKIRLILSLINNWEAYGGKAQ YVKWGKAAGLNLTSDDQFFSHPTLKSYYKAHVKNLLNRVNTFTNITYKDDPTIFAWELINEPRCTLDPSGDTLQAWIEEMAVFVKSIDPKHLVEIGMEGF YGLSTPNKVQYNPNTYAQQVGTDFIRNHLALGIDFASVHIYADSWISPSITDAHLQFTKSWMEAHIEDAEMYLGMPVLFSEFGVSANDPGYNSSFRNTLI SLVYKTLLNSTKKGGAGAGSLLWQLFPEGTDYMD |
Full Sequence |
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Protein Sequence Length: 470 Download |
MDVALKLLFS CVVVVFVVFV NDGPAVCGGE AMEPLEMVVD GAENQCPSFS GSGNGGAYPG 60 DTEDDAWPMV QKKGNQFVVN DHPFYVNGFN TYWLMVFAAD ESTRGKVSEV FQQASAVGLT 120 VCRTWAFNDG QWRALQKSPS VYDEVVFKAL DFVVSEAKKY KIRLILSLIN NWEAYGGKAQ 180 YVKWGKAAGL NLTSDDQFFS HPTLKSYYKA HVKNLLNRVN TFTNITYKDD PTIFAWELIN 240 EPRCTLDPSG DTLQAWIEEM AVFVKSIDPK HLVEIGMEGF YGLSTPNKVQ YNPNTYAQQV 300 GTDFIRNHLA LGIDFASVHI YADSWISPSI TDAHLQFTKS WMEAHIEDAE MYLGMPVLFS 360 EFGVSANDPG YNSSFRNTLI SLVYKTLLNS TKKGGAGAGS LLWQLFPEGT DYMDDGYAVV 420 LSKSPSTSNI MSLHSTRLAI FNSVCSWHCR WGCKKKDNIL DAFLYHDDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.005 | 142 | 368 | 234 | + Cellulase (glycosyl hydrolase family 5). | ||
pfam12876 | Cellulase-like | 0.0007 | 226 | 321 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
COG2730 | BglC | 0.0001 | 123 | 421 | 322 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
COG3934 | COG3934 | 1.0e-29 | 110 | 434 | 334 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18019.1 | 0 | 6 | 469 | 11 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273230.1 | 0 | 60 | 469 | 2 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002273389.1 | 0 | 60 | 469 | 2 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323680.1 | 0 | 61 | 469 | 9 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528703.1 | 0 | 6 | 469 | 7 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 70 | 439 | 7 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 78 | 430 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 78 | 430 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 78 | 430 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 78 | 430 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |