Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.005G120500.1 |
Family | GH5 |
Protein Properties | Length: 436 Molecular Weight: 49648.2 Isoelectric Point: 9.9597 |
Chromosome | Chromosome/Scaffold: 05 Start: 9386456 End: 9389339 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 40 | 361 | 1.1e-32 |
NGSPYYANGFNAYWLMYTASDPSQRPKVSAAFREAASHGLTVARTWAFSDGGYRPLQYSPGSYNEQMFKGLDFVVAEARSYGIKLILSFANNYDSFGGKK QYVNWARSRGQYLSSDDDFFRHPVVKGYYKNHIKTVLYRYNSFTGIRFKDDPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASFVKSIDRNHLLEAGLEG FYGPSTPQRNSLNLGLKIGTDFIANNRIPEIDFATVHAYPDQWLSSSNDQNQLSFLNNWLDTHIQDAQNSLRKPILIAEFGKSWKYPGFSTYQRDLLFNT VYYKIYSSAKRGGAAAGGLFWQ |
Full Sequence |
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Protein Sequence Length: 436 Download |
MTYLALALLL VVLIHQGCFH FHVEAGDGFI RTRGVHFLLN GSPYYANGFN AYWLMYTASD 60 PSQRPKVSAA FREAASHGLT VARTWAFSDG GYRPLQYSPG SYNEQMFKGL DFVVAEARSY 120 GIKLILSFAN NYDSFGGKKQ YVNWARSRGQ YLSSDDDFFR HPVVKGYYKN HIKTVLYRYN 180 SFTGIRFKDD PTIMAWELMN EPRCTSDPSG RTIQAWIAEM ASFVKSIDRN HLLEAGLEGF 240 YGPSTPQRNS LNLGLKIGTD FIANNRIPEI DFATVHAYPD QWLSSSNDQN QLSFLNNWLD 300 THIQDAQNSL RKPILIAEFG KSWKYPGFST YQRDLLFNTV YYKIYSSAKR GGAAAGGLFW 360 QLLTEGMDNF HDGYEIMLGQ PSSTANVIAQ QAHKLYQIRK IFLRMRNVER WKRARAARAR 420 RVHWRGGNGG KRIGN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 9.0e-5 | 40 | 320 | 288 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 3.0e-24 | 37 | 375 | 340 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32548.1 | 0 | 15 | 435 | 15 | 433 | endo-1,4-beta-mannosidase protein 2 [Prunus persica] |
GenBank | ABY58035.1 | 0 | 15 | 435 | 15 | 433 | mannase [Prunus salicina] |
GenBank | ACN78662.1 | 0 | 1 | 435 | 1 | 433 | endo-beta-mannanase [Actinidia arguta] |
RefSeq | XP_002264115.1 | 0 | 19 | 435 | 19 | 433 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002327685.1 | 0 | 1 | 435 | 1 | 435 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 25 | 398 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 33 | 374 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 33 | 374 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 33 | 374 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 33 | 374 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |