Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G149200.1 |
Family | GH5 |
Protein Properties | Length: 306 Molecular Weight: 35245.6 Isoelectric Point: 5.4269 |
Chromosome | Chromosome/Scaffold: 01 Start: 20485190 End: 20486443 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 14 | 302 | 1.2e-24 |
TDAFQKASETSLNAARIWAFDDSDHRPLQSSPGPCNEEVFKGLDFVIAKARKLGIYMILSLMNNWKDYGGKDKYVEWANQHYHNLNRNIRNLIEDDFFID SLTKEYYKNHVKTVLTRNNTITRVAYKDDPTILAWELKNEPCCPSDPTGSNLESIDNKHLLEIGLEGFYWESRQQYNPNSNLDGTDFIANNQIPDIEFAT IHLYPESWLPSINKTEAEKLAFVEKWIGSHVLDSNTVLEKPIVISEFGKSYKLEGYSLDKRNKYFQKIYDDVYNSARLGGPFVGGLFWQ |
Full Sequence |
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Protein Sequence Length: 306 Download |
MMFAADYSTR NKVTDAFQKA SETSLNAARI WAFDDSDHRP LQSSPGPCNE EVFKGLDFVI 60 AKARKLGIYM ILSLMNNWKD YGGKDKYVEW ANQHYHNLNR NIRNLIEDDF FIDSLTKEYY 120 KNHVKTVLTR NNTITRVAYK DDPTILAWEL KNEPCCPSDP TGSNLESIDN KHLLEIGLEG 180 FYWESRQQYN PNSNLDGTDF IANNQIPDIE FATIHLYPES WLPSINKTEA EKLAFVEKWI 240 GSHVLDSNTV LEKPIVISEF GKSYKLEGYS LDKRNKYFQK IYDDVYNSAR LGGPFVGGLF 300 WQLMT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3934 | COG3934 | 2.0e-17 | 15 | 263 | 261 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1RH9 | 0 | 1 | 304 | 32 | 337 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
GenBank | AAK56557.1 | 0 | 1 | 304 | 58 | 363 | mannan endo-1,4-beta-mannosidase [Solanum lycopersicum] |
Swiss-Prot | Q8L5J1 | 0 | 1 | 304 | 58 | 363 | MAN4_SOLLC RecName: Full=Mannan endo-1,4-beta-mannosidase 4; AltName: Full=Beta-mannanase 4; AltName: Full=Endo-beta-1,4-mannanase 4; AltName: Full=LeMAN4a; AltName: Full=LeMAN4i; Flags: Precursor |
RefSeq | XP_002302695.1 | 0 | 1 | 305 | 62 | 369 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515142.1 | 0 | 1 | 305 | 62 | 369 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 1 | 304 | 32 | 337 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 8e-36 | 7 | 303 | 39 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 8e-36 | 7 | 303 | 39 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 8e-36 | 7 | 303 | 39 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 8e-36 | 7 | 303 | 39 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK974111 | 319 | 1 | 305 | 0 |
DV137789 | 266 | 49 | 303 | 0 |
DV139106 | 263 | 52 | 303 | 0 |
HO794665 | 317 | 1 | 305 | 0 |
JZ191173 | 298 | 24 | 305 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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