| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.007G119100.1 |
| Family | GH5 |
| Protein Properties | Length: 412 Molecular Weight: 46526.6 Isoelectric Point: 6.7241 |
| Chromosome | Chromosome/Scaffold: 07 Start: 9388484 End: 9391784 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 49 | 357 | 3.2e-34 |
| NGKPFYLNGFNAYWMMMFASDNSTRSKVTDAFREASKYGMNIARTWAFNDGDYKPLQNSPGSYNEDVFKGLDFVVAEANKYGIHLILSLANNFKDFGGKD KYVQWAKQRGRNLSKEDDFFTDSVVKKYYKNHITAVLTRINTITGVAYKDDPIIFAWELMNEPRCPSDPSGANLQNWVKEMAAHVKSIDNYHLLEIGLEG FYGESMPEKKQYNPNSYSIGTDFISNNQIPEVDFATIHIYPEQWLPSTNSSEEAQLGFVDKWIEAHTMDCNSVLKKPLVIGEFGKSFKLPGYSLEKRNEY FQRIYKAIY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 412 Download |
| MKASHWFNSF IVLLVLILTM DFRHGIYYAR ADAGGTGFVQ TTATKFVING KPFYLNGFNA 60 YWMMMFASDN STRSKVTDAF REASKYGMNI ARTWAFNDGD YKPLQNSPGS YNEDVFKGLD 120 FVVAEANKYG IHLILSLANN FKDFGGKDKY VQWAKQRGRN LSKEDDFFTD SVVKKYYKNH 180 ITAVLTRINT ITGVAYKDDP IIFAWELMNE PRCPSDPSGA NLQNWVKEMA AHVKSIDNYH 240 LLEIGLEGFY GESMPEKKQY NPNSYSIGTD FISNNQIPEV DFATIHIYPE QWLPSTNSSE 300 EAQLGFVDKW IEAHTMDCNS VLKKPLVIGE FGKSFKLPGY SLEKRNEYFQ RIYKAIYSSA 360 RNGGSCDGGL FWQLLSLGMD NMGDGYQVVL EQSPSTASVI AQQSRLLSSL T* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00633 | Glyco_10 | 0.004 | 139 | 211 | 87 | + Glycosyl hydrolase family 10. | ||
| pfam12876 | Cellulase-like | 0.001 | 195 | 288 | 103 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 1.0e-7 | 49 | 332 | 297 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 2.0e-26 | 46 | 394 | 359 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABG88068.1 | 0 | 10 | 411 | 14 | 410 | endo-1,4-beta-mannanase [Glycine max] |
| EMBL | CAC08442.1 | 0 | 39 | 411 | 45 | 416 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
| EMBL | CAC51690.3 | 0 | 38 | 410 | 26 | 396 | endo-beta-1,4-mannanase [Lactuca sativa] |
| RefSeq | XP_002302695.1 | 0 | 6 | 409 | 3 | 402 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515142.1 | 0 | 14 | 410 | 9 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 38 | 411 | 6 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 47 | 407 | 21 | 383 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 47 | 407 | 21 | 383 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 47 | 407 | 21 | 383 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 47 | 407 | 21 | 383 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
