Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G186400.1 |
Family | GH5 |
Protein Properties | Length: 452 Molecular Weight: 50628.9 Isoelectric Point: 9.1066 |
Chromosome | Chromosome/Scaffold: 10 Start: 53751088 End: 53754083 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 63 | 395 | 1.4e-32 |
NQSTFYINGWNSYWLMQESVWAGPSRSRVSKMLKKGAEMGLTVCRTWAFNDGVGPNALQISPGVFNERVFRGLDYVIVEARKRGIRLILSLVNNLSNFGG KAQYVRWAQEAGHNVSSSTDSFFSHPMIKDYYKAYVKAILSRKNSLSGVKYADEPAIFAWELMNEPRCSSSSSAPILQHGVQAWLNEMAAFVKSLDQKHL VTVGLEGFYGLNTTKGLEVNPGEWAASLGSDFIQNSAIENIDFASIHAYPDSWMPHDDMEAKARFLSRWVDSHISDGDHVLKKPVIFTEVGSLVHADNQG LADKDILLKTMYEKIYESAKKRQAGAGALIWQL |
Full Sequence |
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Protein Sequence Length: 452 Download |
MASDWRDKKL YPLLGILLLS IFLYFNLGSN PITFPILWQS HMGFVSANST HFIIVNPRAP 60 LENQSTFYIN GWNSYWLMQE SVWAGPSRSR VSKMLKKGAE MGLTVCRTWA FNDGVGPNAL 120 QISPGVFNER VFRGLDYVIV EARKRGIRLI LSLVNNLSNF GGKAQYVRWA QEAGHNVSSS 180 TDSFFSHPMI KDYYKAYVKA ILSRKNSLSG VKYADEPAIF AWELMNEPRC SSSSSAPILQ 240 HGVQAWLNEM AAFVKSLDQK HLVTVGLEGF YGLNTTKGLE VNPGEWAASL GSDFIQNSAI 300 ENIDFASIHA YPDSWMPHDD MEAKARFLSR WVDSHISDGD HVLKKPVIFT EVGSLVHADN 360 QGLADKDILL KTMYEKIYES AKKRQAGAGA LIWQLLVEGV GEYSDRFSFV AWDNPSTYKL 420 ILKQSCRLKS IFAKSIQSRK LNKDPCSGNL P* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.004 | 167 | 395 | 236 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 0.0004 | 60 | 229 | 179 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
COG3934 | COG3934 | 2.0e-20 | 95 | 406 | 313 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN77937.1 | 0 | 1 | 450 | 1 | 445 | hypothetical protein [Vitis vinifera] |
EMBL | CBI33116.1 | 0 | 1 | 448 | 1 | 441 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002272403.1 | 0 | 1 | 450 | 1 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307872.1 | 0 | 42 | 440 | 1 | 393 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520563.1 | 0 | 1 | 440 | 1 | 431 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 40 | 431 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 57 | 406 | 16 | 351 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 57 | 406 | 16 | 351 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 57 | 406 | 16 | 351 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 57 | 406 | 16 | 351 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |