Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G124800.1 |
Family | GH5 |
Protein Properties | Length: 470 Molecular Weight: 53146.6 Isoelectric Point: 5.0714 |
Chromosome | Chromosome/Scaffold: 11 Start: 17668386 End: 17671723 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 81 | 415 | 4.8e-36 |
NGQPFYVNGFNTYWLMVFAADQSTRGKVSELFQQASSVGLTVCRTWAFNDGQWRALQKSPSVYDEEVFKALDFVVSEAKKYKIRLILSLVNNWDAYGGKA QYVKWGNASGLNLTSDDEFFSHPTLRSYYKSNVKAVLNRVNTFTNITYKNDPTIFAWELMNEPRCTSDPSGDTLQSWIAEMAAYVKSLDAKHMVEIGLEG FYGPSAPARTQFNPNSYATQVGTDFIRNHQALGVDFASVHIYADSWISPTISDAHLEFTKSWMEAHIEDAEKYLGMPVIFSEFGVSRKDPGYNSSYRDTL IMTVYKTLLNSTKKGGSGAGSLLWQLFPDGTDYMD |
Full Sequence |
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Protein Sequence Length: 470 Download |
MDTCKRCFIL SLVFFMVFFE DLGTNVHGFQ GEEQIETAVE DFLDHSPHFT TTQGMYDVEE 60 VGDDDDDWQM VRAKGNQFVV NGQPFYVNGF NTYWLMVFAA DQSTRGKVSE LFQQASSVGL 120 TVCRTWAFND GQWRALQKSP SVYDEEVFKA LDFVVSEAKK YKIRLILSLV NNWDAYGGKA 180 QYVKWGNASG LNLTSDDEFF SHPTLRSYYK SNVKAVLNRV NTFTNITYKN DPTIFAWELM 240 NEPRCTSDPS GDTLQSWIAE MAAYVKSLDA KHMVEIGLEG FYGPSAPART QFNPNSYATQ 300 VGTDFIRNHQ ALGVDFASVH IYADSWISPT ISDAHLEFTK SWMEAHIEDA EKYLGMPVIF 360 SEFGVSRKDP GYNSSYRDTL IMTVYKTLLN STKKGGSGAG SLLWQLFPDG TDYMDDGYAI 420 VLAKSPSTSN LISLHSTRVA IFNSRCSWKC RWGCRKKNSL ETFLYHDDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 6.0e-5 | 81 | 369 | 304 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 3.0e-5 | 110 | 422 | 334 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
COG3934 | COG3934 | 2.0e-27 | 112 | 426 | 324 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19893.1 | 0 | 56 | 469 | 50 | 462 | unknown [Glycine max] |
EMBL | CBI18019.1 | 0 | 10 | 469 | 14 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309191.1 | 0 | 56 | 469 | 5 | 415 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323680.1 | 0 | 55 | 469 | 1 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528703.1 | 0 | 1 | 469 | 1 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 71 | 440 | 7 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 79 | 429 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 79 | 429 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 79 | 429 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 79 | 429 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |