| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.007G297200.4 |
| Family | GH2 |
| Protein Properties | Length: 778 Molecular Weight: 89152.1 Isoelectric Point: 6.2169 |
| Chromosome | Chromosome/Scaffold: 07 Start: 50737042 End: 50741195 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 28 | 534 | 0 |
| FFDQYTRAYLHATTELENRSAWVADCSLNIQVATELEGSVCLIEHLQTQHVSVPPGARIQYTFPKLSFYKPNLWWPNGLGKQSLYNVSITVDVKGYGESD TWGHLFGFRKIESHIDRATGGRLFKVNGQPIFIRGGNWILSDCLLRLSKERYKTDIKFHADMNLNMIRCWGGGLAERPEFYHYCDVYGLLVWQEFWITGD VDGRGIPISNPDGPLDHDLFMLCARDTVKLLRNYPSLALWVGGNEQVPPDDINTALKNDLKLHPLFESHSENALSIEEEDPSQYLDGTRVYIQGSMWDGF ANGKGDFTDGPYEIQNPEDFFKDNFYNYGFNPEVGSVGMPVAATIRATMPPKGWQIPLFKKLTNGYTEEVPNPIWEYHKYIPYSKPGKVHDQIELYGIPK DLDDFCLKAQLVNYVQYRALLEGWTSRMWSKYTGVLIWKTQNPWSGLRGQFYDYLLDQTAGFYGCRCAAEPIHVQLNLATYFIEVVNTTSEELSNVAVEA SVWDLEG | |||
| Full Sequence |
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| Protein Sequence Length: 778 Download |
| MELSTYHTTQ CHKPKPVKII DPHLVSSFFD QYTRAYLHAT TELENRSAWV ADCSLNIQVA 60 TELEGSVCLI EHLQTQHVSV PPGARIQYTF PKLSFYKPNL WWPNGLGKQS LYNVSITVDV 120 KGYGESDTWG HLFGFRKIES HIDRATGGRL FKVNGQPIFI RGGNWILSDC LLRLSKERYK 180 TDIKFHADMN LNMIRCWGGG LAERPEFYHY CDVYGLLVWQ EFWITGDVDG RGIPISNPDG 240 PLDHDLFMLC ARDTVKLLRN YPSLALWVGG NEQVPPDDIN TALKNDLKLH PLFESHSENA 300 LSIEEEDPSQ YLDGTRVYIQ GSMWDGFANG KGDFTDGPYE IQNPEDFFKD NFYNYGFNPE 360 VGSVGMPVAA TIRATMPPKG WQIPLFKKLT NGYTEEVPNP IWEYHKYIPY SKPGKVHDQI 420 ELYGIPKDLD DFCLKAQLVN YVQYRALLEG WTSRMWSKYT GVLIWKTQNP WSGLRGQFYD 480 YLLDQTAGFY GCRCAAEPIH VQLNLATYFI EVVNTTSEEL SNVAVEASVW DLEGACPSYN 540 VFDKLSLPPK KVMSISELNH PKSENPKPVY FLLLKLYNMS NNSIISRNFY WLYLPGGDYK 600 LLEPYRNKRI PLQITSKTSH KDSSYEIEMN VQNKSEKPDP KILTYKNKFA NRREDGEFDM 660 SSLEPIHDKT EEKQKAGLFQ RLYRQFPRET DGSKITEIKG SDVGVVFFLK FSVHALKTDN 720 KGGEDTRILP VHYSDNYFSL VPGEEMSIKM SFEVPQGVTP RVTLEGWNYQ SEVHTVI* 780 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02836 | Glyco_hydro_2_C | 0.004 | 150 | 272 | 127 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK09525 | lacZ | 4.0e-6 | 12 | 272 | 295 | + beta-D-galactosidase; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 2.0e-8 | 17 | 136 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 3.0e-9 | 15 | 272 | 271 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 7.0e-23 | 98 | 272 | 180 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK84953.2 | 0 | 37 | 777 | 40 | 786 | putative beta-mannosidase [Gossypium hirsutum] |
| GenBank | AAO27794.1 | 0 | 16 | 777 | 209 | 976 | glycosyl hydrolase [Gossypium hirsutum] |
| RefSeq | XP_002284576.1 | 0 | 16 | 772 | 208 | 969 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319539.1 | 0 | 16 | 771 | 208 | 968 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 16 | 771 | 208 | 968 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 3e-37 | 11 | 592 | 221 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 3e-37 | 11 | 592 | 221 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 7e-37 | 11 | 592 | 221 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 367 | 180 | 544 | 0 |
| ES832790 | 364 | 295 | 658 | 0 |
| CO125453 | 276 | 427 | 702 | 0 |
| GO871600 | 333 | 108 | 435 | 0 |
| CO118180 | 271 | 34 | 304 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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