| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10006730m |
| Family | GH2 |
| Protein Properties | Length: 925 Molecular Weight: 105270 Isoelectric Point: 6.0056 |
| Chromosome | Chromosome/Scaffold: 5 Start: 12685566 End: 12689505 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 39 | 720 | 0 |
| QSRWMEAVVPGTVLGTLVMNKSVPDPFYGLENEAITDIADSGRDYYTFWFFTQFQCKRLLNQHVHLNFRAINYSAEVYVNGHKTVLPKGMFRRHTLDVTD ILHPENNLLAVIVHPPDHPGTIPPEGGQGGDHEIGKDVAAQYVEGWDWICPIRDRNTGIWDEVSISVTGPVRIIDPHLVSTFFDDYKRAYLHVTAELENK STWNADCSVKIQITSELENGFCLVEHLQTENVLIPAQGRIQHTFNPLFFYKPELWWPNGMGKQILYDVLITVVVKEFGESDSWMQPFGFRKIESDIDTVT GGRLFKINGEPIFIRGGNWILSDGLLRLSKERYRTDIKFHADMNMNMIRCWGGGLAERPDFYHFCDIYGLLVWQEFWITGDVDGRGVPVSNPNGPLDHDL FLLCARDTVKLLRNHPSLALWVGGNEQVPPKDINEALKQDLTLHPYFKTQWLSDQDSDPSVFLDGTRVYIQGSMWDGFADGKGNFTDGPYEIQYPEDFFK DTFYKFGFNPEVGSVGMPVADTIRATMPQEGWEIPLFKKGSDGFVEEVPNRMWDYHKYIPYSKPGKAQLVNYIQYRALFEGWSSRMWTKYTGVLIWKNQN PWTGLRGQFYDHLLDQTASFYGCRSAAEPVHVQLNLASYFVEIVNTTSKEISDVEIEASVWDLDGNCPYTKVFNKVSAPPKK | |||
| Full Sequence |
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| Protein Sequence Length: 925 Download |
| MAEIGKTVLD SGWLAARSTE IDDDGVQLTT TNPPSLGSQS RWMEAVVPGT VLGTLVMNKS 60 VPDPFYGLEN EAITDIADSG RDYYTFWFFT QFQCKRLLNQ HVHLNFRAIN YSAEVYVNGH 120 KTVLPKGMFR RHTLDVTDIL HPENNLLAVI VHPPDHPGTI PPEGGQGGDH EIGKDVAAQY 180 VEGWDWICPI RDRNTGIWDE VSISVTGPVR IIDPHLVSTF FDDYKRAYLH VTAELENKST 240 WNADCSVKIQ ITSELENGFC LVEHLQTENV LIPAQGRIQH TFNPLFFYKP ELWWPNGMGK 300 QILYDVLITV VVKEFGESDS WMQPFGFRKI ESDIDTVTGG RLFKINGEPI FIRGGNWILS 360 DGLLRLSKER YRTDIKFHAD MNMNMIRCWG GGLAERPDFY HFCDIYGLLV WQEFWITGDV 420 DGRGVPVSNP NGPLDHDLFL LCARDTVKLL RNHPSLALWV GGNEQVPPKD INEALKQDLT 480 LHPYFKTQWL SDQDSDPSVF LDGTRVYIQG SMWDGFADGK GNFTDGPYEI QYPEDFFKDT 540 FYKFGFNPEV GSVGMPVADT IRATMPQEGW EIPLFKKGSD GFVEEVPNRM WDYHKYIPYS 600 KPGKAQLVNY IQYRALFEGW SSRMWTKYTG VLIWKNQNPW TGLRGQFYDH LLDQTASFYG 660 CRSAAEPVHV QLNLASYFVE IVNTTSKEIS DVEIEASVWD LDGNCPYTKV FNKVSAPPKK 720 VVQISEFKYP KSENPKPVYF LLLKLYHVSD KTVISRNFYW LHLPGQDYTL LEPFRKKQIP 780 LKITCSSVMV GPKYELEINV HNTSRAGLAK NALQDDGKRD PGLLQKLFTR CVVSADSNRG 840 LKVVEMEGSD LGVAFFLRFS VHNAETEKQD TRILPVHYSD NYFSLVPGES MSFKISFAVP 900 KGMKKSPRVM LRGWNYPDGF TVFG* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK09525 | lacZ | 2.0e-7 | 193 | 464 | 297 | + beta-D-galactosidase; Reviewed | ||
| PRK10150 | PRK10150 | 1.0e-9 | 37 | 464 | 456 | + beta-D-glucuronidase; Provisional | ||
| pfam00703 | Glyco_hydro_2 | 2.0e-10 | 209 | 328 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 3.0e-17 | 98 | 464 | 385 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 4.0e-41 | 61 | 464 | 409 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE97370.1 | 0 | 1 | 924 | 1 | 946 | endo-beta-mannosidase [Brassica oleracea] |
| EMBL | CBI36793.1 | 0 | 1 | 923 | 1 | 951 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_563833.2 | 0 | 1 | 924 | 1 | 944 | glycoside hydrolase family 2 protein [Arabidopsis thaliana] |
| RefSeq | XP_002319539.1 | 0 | 1 | 923 | 1 | 973 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 1 | 923 | 1 | 973 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 2 | 761 | 46 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 2 | 761 | 46 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 2 | 761 | 46 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 376 | 372 | 720 | 0 |
| GO871600 | 315 | 300 | 606 | 0 |
| EX109426 | 264 | 104 | 366 | 0 |
| GO848159 | 321 | 165 | 485 | 0 |
| ES818807 | 293 | 159 | 451 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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