| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g113570.1 |
| Family | GH2 |
| Protein Properties | Length: 967 Molecular Weight: 109800 Isoelectric Point: 5.24 |
| Chromosome | Chromosome/Scaffold: 7 Start: 36749814 End: 36756619 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH2 | 4 | 758 | 0 |
| EEQHRKTTFDGGWLAARSTEINFTGIQLTTTHPPTSSTPPWIEAVVPGTVLATLVKNKVVPDPFYGLQNQTIIDIADSGRDFYTFWFFTTFQCNLSTNQY CDLNFRGINYSADVYLNGHKTVLPKGMFRRHSIDVTDILHPDGNNLLAVLVHPPDHPGTIPPEGGQGGDHEIGKDVTTQYVEGWDWMAPIRDRNTGIWDE VSISITGPVKIIDPHLVSSFFDNYERAYLHTTTELENRSSWTAECSLTVQVTMELEDNICLVEHLQTQNLPVPANSRVQYTFPELFFYKPNLWWPNGMGK QSLYNVVISIDVKGFGESDSWSHLFGFRKIESHIDDATGGRLFKVNGEPVFIRGGNWILSDGLLRLSKKRYDTDIKFHADMNFNMIRCWGGGLTERPEFY HYCDYYGLLVWQEFWITGDVDGRGVPISNPDGPLDHDLFLFCARDTVKLLRNHPSLALWVGGNEQTPPCDINATLKADLKLHPNFESADENIKSAGDLSP VLRDPSQYLDGTRVYIQGSMWDGFADGMGNFTDGPYEIQNPEDFFKDNFYDYGFNPEVGSVGMPVASTIRATMPPEGWQIPVFKKLPNGYVEEVPNPIWE YHKYIPYSKPNKVHDQIQLYGTVRDLDDFCLKAQLVNYIQYRALLEGWTSRMWSKYTGVLIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQL NLATYFIEVVNTTSEELSNVAVEASVWDLEGTRPYYKVHENLSLLPKKVAPIVEM | |||
| Full Sequence |
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| Protein Sequence Length: 967 Download |
| MATEEQHRKT TFDGGWLAAR STEINFTGIQ LTTTHPPTSS TPPWIEAVVP GTVLATLVKN 60 KVVPDPFYGL QNQTIIDIAD SGRDFYTFWF FTTFQCNLST NQYCDLNFRG INYSADVYLN 120 GHKTVLPKGM FRRHSIDVTD ILHPDGNNLL AVLVHPPDHP GTIPPEGGQG GDHEIGKDVT 180 TQYVEGWDWM APIRDRNTGI WDEVSISITG PVKIIDPHLV SSFFDNYERA YLHTTTELEN 240 RSSWTAECSL TVQVTMELED NICLVEHLQT QNLPVPANSR VQYTFPELFF YKPNLWWPNG 300 MGKQSLYNVV ISIDVKGFGE SDSWSHLFGF RKIESHIDDA TGGRLFKVNG EPVFIRGGNW 360 ILSDGLLRLS KKRYDTDIKF HADMNFNMIR CWGGGLTERP EFYHYCDYYG LLVWQEFWIT 420 GDVDGRGVPI SNPDGPLDHD LFLFCARDTV KLLRNHPSLA LWVGGNEQTP PCDINATLKA 480 DLKLHPNFES ADENIKSAGD LSPVLRDPSQ YLDGTRVYIQ GSMWDGFADG MGNFTDGPYE 540 IQNPEDFFKD NFYDYGFNPE VGSVGMPVAS TIRATMPPEG WQIPVFKKLP NGYVEEVPNP 600 IWEYHKYIPY SKPNKVHDQI QLYGTVRDLD DFCLKAQLVN YIQYRALLEG WTSRMWSKYT 660 GVLIWKTQNP WTGLRGQFYD HLLDQTAGFY GCRCAAEPIH VQLNLATYFI EVVNTTSEEL 720 SNVAVEASVW DLEGTRPYYK VHENLSLLPK KVAPIVEMKY PESKNPKPVY FLLLRLYNMS 780 DHKIISRNFY WFHPSGGDYS LLEPYRKKKI PLKITSKISV DESTYNIQVN VTNTSEKSNS 840 KIPMLGYSST ASACGVGKED ETGWFNRIQR CFAGKNDGLK FSEINGDDVG VAFFLHLSVH 900 ASKTEYKEGE DTRILPVHYS DNYFSLVPGE SMPVNISFEV PQGVTPRVTL DGWNYDGRQQ 960 SILEIV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK09525 | lacZ | 1.0e-6 | 196 | 467 | 298 | + beta-D-galactosidase; Reviewed | ||
| PRK10150 | PRK10150 | 8.0e-7 | 106 | 467 | 387 | + beta-D-glucuronidase; Provisional | ||
| pfam00703 | Glyco_hydro_2 | 4.0e-10 | 212 | 331 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 3.0e-12 | 106 | 480 | 390 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 4.0e-36 | 45 | 474 | 437 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN82620.1 | 0 | 9 | 954 | 6 | 965 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36793.1 | 0 | 9 | 954 | 6 | 943 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284576.1 | 0 | 9 | 954 | 6 | 965 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319539.1 | 0 | 9 | 955 | 6 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 9 | 957 | 6 | 968 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 41 | 792 | 78 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 41 | 792 | 78 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 41 | 792 | 78 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 336 | 376 | 711 | 0 |
| GO871600 | 333 | 303 | 635 | 0 |
| ES832790 | 305 | 501 | 805 | 0 |
| ES818807 | 293 | 162 | 454 | 0 |
| ES818807 | 128 | 446 | 562 | 0.00003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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