Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00056127m |
Family | GT20 |
Protein Properties | Length: 533 Molecular Weight: 59090.3 Isoelectric Point: 4.9686 |
Chromosome | Chromosome/Scaffold: 076445 Start: 3 End: 2999 |
Description | trehalose phosphate synthase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 1 | 208 | 0 |
GRKVLLGVDDIDLFKGIDLKLSAMEKLLESQRELRGRVVLVQINNPARSPGRDIDAVRAEVKAMRDRINGRFSLPGYDPIVMIDDPLTMHEKLAFYTSAD ICIVTAVRDGLNRIPYIYTACRQEGPLASGVAGAPRESAIVLSEFVGCSPSLSGAVRVNPWNVDDVADGMESALLLDKRDRQMRQEKHYKYVITHDIAYW GRSLDQDL |
Full Sequence |
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Protein Sequence Length: 533 Download |
GRKVLLGVDD IDLFKGIDLK LSAMEKLLES QRELRGRVVL VQINNPARSP GRDIDAVRAE 60 VKAMRDRING RFSLPGYDPI VMIDDPLTMH EKLAFYTSAD ICIVTAVRDG LNRIPYIYTA 120 CRQEGPLASG VAGAPRESAI VLSEFVGCSP SLSGAVRVNP WNVDDVADGM ESALLLDKRD 180 RQMRQEKHYK YVITHDIAYW GRSLDQDLLR ASEDHASMNI LSVGFAMNFR IVVLGPNFHK 240 LSPGDINPSY HRTGNRLILL DYDGTVMPEG VTIRYPSQEL IRVLNELCSD PKNTVFVVSG 300 RGKDELAEWL APCERLGISA EHGYFTRWSR DSPWESPNLV IGLDWKNLVE PVMKHYTDVT 360 DGSYIEAKET ALVWHYEEAD PDFGSCQAKD LQDHLLSVLA KEPVCVKSGH KIVEVNPQDV 420 GKGIAVRNLI ATMGARGSLP DFILCVGDDR SDEDMFAAIT TPSSNFAFPE SAEIFACTLG 480 NKPSLAKYYL EDSDDVLKML KGLMDSSRPG GALQTQVFEG PLRVSQEWPG SW* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 2.0e-74 | 1 | 456 | 489 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
pfam02358 | Trehalose_PPase | 7.0e-80 | 259 | 494 | 240 | + Trehalose-phosphatase. This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. | ||
PLN03063 | PLN03063 | 2.0e-86 | 1 | 503 | 547 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PRK14501 | PRK14501 | 7.0e-109 | 1 | 506 | 508 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
PLN02205 | PLN02205 | 0 | 1 | 507 | 511 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN35749.1 | 0 | 1 | 522 | 26 | 551 | unknown [Zea mays] |
GenBank | EAZ07161.1 | 0 | 1 | 506 | 302 | 806 | hypothetical protein OsI_29408 [Oryza sativa Indica Group] |
RefSeq | NP_001061925.1 | 0 | 1 | 506 | 302 | 806 | Os08g0445700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002444439.1 | 0 | 1 | 521 | 295 | 823 | hypothetical protein SORBIDRAFT_07g021920 [Sorghum bicolor] |
RefSeq | XP_002452959.1 | 0 | 1 | 522 | 326 | 849 | hypothetical protein SORBIDRAFT_04g035560 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wtx_D | 1e-18 | 5 | 208 | 258 | 451 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_C | 1e-18 | 5 | 208 | 258 | 451 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_B | 1e-18 | 5 | 208 | 258 | 451 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_A | 1e-18 | 5 | 208 | 258 | 451 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1gz5_D | 1e-18 | 5 | 208 | 257 | 450 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777775 | 508 | 1 | 503 | 0 |
HO797286 | 467 | 45 | 507 | 0 |
FL798974 | 243 | 141 | 383 | 0 |
HO795511 | 468 | 42 | 507 | 0 |
HO455803 | 486 | 45 | 508 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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