| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00061089m |
| Family | GT20 |
| Protein Properties | Length: 886 Molecular Weight: 99731.1 Isoelectric Point: 5.8731 |
| Chromosome | Chromosome/Scaffold: 001311 Start: 1714 End: 5729 |
| Description | trehalose-phosphatase/synthase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT20 | 76 | 567 | 0 |
| LAGDRLIVVANTLPVRGERRPDGRGWSFTWDEDSLLFHLRDGLPDDMDMEVLYVGSLHADVPPADQDDVAQALLDRFRCIPAFLPKDLCDRFYHGFCKQT LWPLIHYMLPYSTADHGGRFDRSHWEAYVLANKLFSQRVIEVLNPDDDYVWIHDYHLLALPSFLRRRFNRLRIGFFLHSPFPSSELYRSLPVRDEILKSL LNCDLIGFHTFDYARHFLSCCSRMLGIDYQSKRGYIGLDYFGRTVGIKIMPVGINMEHLQSLLQKPDLERKVAELRSQFNRKTVLLGVDDMDIFKGIDLK ILAFEQMLKAHPKWQGRAVLVQIANPKGGSRKELEELQAKIEQSCKRINDQFGRPGYSPVVLVNRALSSVERMAYYTIAECVVVTAVRDGMNLTPYEYIV CRQGIPGLDGSGDDRPRGKSMLVVSEFIGCSPSLSGAIRVNPWNIESTAEAMNESIASSDNEKQLRHEKHYRYVSSHDVAYWSKSFIHDFER | |||
| Full Sequence |
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| Protein Sequence Length: 886 Download |
| MFSRSYTNLL DLANGNLSAL DYGGGGGGGT AAGGAGAGGR PPRARRMQRT STTPGTFADL 60 DEDRAGSVAS DAQSSLAGDR LIVVANTLPV RGERRPDGRG WSFTWDEDSL LFHLRDGLPD 120 DMDMEVLYVG SLHADVPPAD QDDVAQALLD RFRCIPAFLP KDLCDRFYHG FCKQTLWPLI 180 HYMLPYSTAD HGGRFDRSHW EAYVLANKLF SQRVIEVLNP DDDYVWIHDY HLLALPSFLR 240 RRFNRLRIGF FLHSPFPSSE LYRSLPVRDE ILKSLLNCDL IGFHTFDYAR HFLSCCSRML 300 GIDYQSKRGY IGLDYFGRTV GIKIMPVGIN MEHLQSLLQK PDLERKVAEL RSQFNRKTVL 360 LGVDDMDIFK GIDLKILAFE QMLKAHPKWQ GRAVLVQIAN PKGGSRKELE ELQAKIEQSC 420 KRINDQFGRP GYSPVVLVNR ALSSVERMAY YTIAECVVVT AVRDGMNLTP YEYIVCRQGI 480 PGLDGSGDDR PRGKSMLVVS EFIGCSPSLS GAIRVNPWNI ESTAEAMNES IASSDNEKQL 540 RHEKHYRYVS SHDVAYWSKS FIHDFERSCR DHFRRRCWGI GLGFGFRVVA LDRNFKKLTV 600 DSIVADYKKS KSRVILLDYD GTLVPQTTID KTPNETIVSM MNTLCADKKN VVFIVSGRGR 660 DSLEKWFYPC PELGIAAEHG YFMRWTRDEQ WQIQNQSPEF EWMHMAEPVM KLYTEATDGS 720 YIETKESALV WHHQDAGPGF GSSQAKEMLD HLESVLANEP VSVKSGQHIV EVKPQAVSKG 780 FVAEKILSTL MEKERQADFV LCIGDDRSDE DMFEKIADIM SRSMVDPQTS LYACTVGQKP 840 SKAIYYLDDA NDVLNMLEAL ADASEEAGSG SPEETEVPST LEEAW* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 2.0e-159 | 80 | 857 | 811 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 857 | 863 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 80 | 567 | 492 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 80 | 857 | 785 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 80 | 566 | 490 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN33296.1 | 0 | 1 | 864 | 1 | 876 | unknown [Zea mays] |
| GenBank | EAZ13427.1 | 0 | 1 | 878 | 1 | 875 | hypothetical protein OsJ_03344 [Oryza sativa Japonica Group] |
| RefSeq | NP_001044141.1 | 0 | 1 | 878 | 1 | 875 | Os01g0730300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002456290.1 | 0 | 1 | 884 | 1 | 891 | hypothetical protein SORBIDRAFT_03g033590 [Sorghum bicolor] |
| RefSeq | XP_002458490.1 | 0 | 1 | 864 | 1 | 874 | hypothetical protein SORBIDRAFT_03g034640 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gz5_D | 0 | 164 | 567 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_C | 0 | 164 | 567 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_B | 0 | 164 | 567 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_A | 0 | 164 | 567 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 2wtx_D | 0 | 164 | 567 | 73 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO777775 | 773 | 90 | 857 | 0 |
| HO779327 | 514 | 123 | 633 | 0 |
| HO779327 | 228 | 630 | 857 | 0 |
| HO795511 | 461 | 397 | 857 | 0 |
| HO777775 | 113 | 1 | 112 | 0.24 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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