APIS family ID | APIS090 | |||||||||||||
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Inhibited defense system | restriction-modification (RM) | |||||||||||||
CLAN ID | CLAN008 | |||||||||||||
Seed protein property |
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Phage property |
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PMID/References | PMID:17188297 18037438 | |||||||||||||
PDB structures | 2JUB; | |||||||||||||
Pfam domains | PF11634.11 | |||||||||||||
Phrog | phrog_4363 | |||||||||||||
Host taxa | d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli | |||||||||||||
Gene Location | Start: 73591; End: 73878; Strand: - | |||||||||||||
Description | Restriction endonuclease inhibitor IpI blocks the ancestral two-component type IV R-M system and represents a third generation bacteriophage defense against restriction nucleases of the Gmr type. |
Genome accession | Start | End | Strand | Protein ID | Length | Molecular weight | Charge | Isoelectric point | Function | Phrog | PFAM |
---|---|---|---|---|---|---|---|---|---|---|---|
NC_000866.4 | 70360 | 70623 | - | NP_049744.1 | 87 | 10199.45 | -7.0 | 4.2080 | hypothetical protein | ||
NC_000866.4 | 71253 | 71918 | - | NP_049745.2 | 221 | 26073.77 | 14.5 | 10.0776 | homing endonuclease | phrog_15209 ; phrog_7168 ; phrog_37840 ; phrog_19446 ; phrog_447 ; phrog_314 | PF01541.27 |
NC_000866.4 | 72628 | 72915 | - | NP_049746.1 | 95 | 11153.69 | -3.0 | 4.8667 | hypothetical protein | ||
NC_000866.4 | 72918 | 73328 | - | NP_049747.1 | 136 | 16034.61 | -6.0 | 4.6254 | hypothetical protein | ||
NC_000866.4 | 73329 | 73514 | - | NP_049748.1 | 61 | 6557.94 | 1.0 | 7.7990 | hypothetical protein | ||
NC_000866.4 | 73591 | 73878 | - | NP_049749.1 | 95 | 10176.80 | 3.0 | 9.6274 | internal virion protein | phrog_4363 | PF11634.11 |
NC_000866.4 | 73952 | 74410 | - | NP_049750.1 | 152 | 17244.53 | -4.5 | 4.9749 | RNA ligase | ||
NC_000866.4 | 74407 | 74649 | - | NP_049751.1 | 80 | 8730.81 | -9.0 | 4.0694 | tail fiber chaperone | phrog_1002 | PF17594.5 |
NC_000866.4 | 74649 | 75374 | - | NP_049752.1 | 241 | 27329.15 | -5.5 | 4.8518 | deoxynucleoside monophosphate kinase | ||
NC_000866.4 | 75424 | 75954 | - | NP_049753.1 | 176 | 19712.27 | -9.5 | 4.1283 | tail protein | phrog_45 | PF06841.15 |
NC_000866.4 | 76061 | 76885 | - | NP_049754.1 | 274 | 31610.09 | 31.0 | 10.7851 | DNA end protector |
Fam ID | Seed protein | Member count | Model | Alignment | APIS090 | NP_049749.1 | 38 | HMM model | Member alignment |
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Member | pident | evalue | bitscore | qcovs | phage | host | SourceDB | Pfam | Phrog |
---|---|---|---|---|---|---|---|---|---|
HQ829472_00267 | 58.511 | 1.24e-29 | 109 | 99% | Escherichia phage Bp7 | Escherichia | INPHARED | PF11634 | phrog_4363 |
IMGVR_UViG_638276012_000001|638276012|638301045 | 88.421 | 1.26e-52 | 167 | 100% | IMGVR | PF11634 | phrog_4363 | ||
KM407600_00149 | 87.368 | 4.44e-52 | 166 | 100% | Shigella phage Shf125875 | Shigella | INPHARED | PF11634 | phrog_4363 |
KU925172_00121 | 91.579 | 5.00e-54 | 171 | 100% | Escherichia phage PE37 | Escherichia | INPHARED | PF11634 | phrog_4363 |
KY703222_00263 | 86.316 | 1.62e-51 | 165 | 100% | Escherichia phage phiC120 | Escherichia | INPHARED | PF11634 | phrog_4363 |
MGV-GENOME-0377451_246 | 98.947 | 1.21e-60 | 188 | 100% | MGV | PF11634 | phrog_4363 | ||
MGV-GENOME-0377517_210 | 86.316 | 1.67e-51 | 165 | 100% | MGV | PF11634 | phrog_4363 | ||
MGV-GENOME-0377573_124 | 88.421 | 1.10e-52 | 168 | 100% | MGV | PF11634 | phrog_4363 | ||
MH051915_00130 | 96.842 | 2.75e-59 | 184 | 100% | Enterobacteria phage vB_EcoM_IME339 | Enterobacteria | INPHARED | PF11634 | phrog_4363 |
MH992122_00149 | 87.368 | 9.27e-52 | 165 | 100% | Escherichia phage OLB35 | Escherichia | INPHARED | PF11634 | phrog_4363 |
MK047718_00016 | 88.421 | 1.16e-52 | 167 | 100% | Escherichia phage p000y | Escherichia | INPHARED | PF11634 | phrog_4363 |
MK962750_00145 | 94.737 | 2.08e-56 | 177 | 100% | Shigella phage CM8 | Shigella | INPHARED | PF11634 | phrog_4363 |
MN850621_00206 | 57.447 | 4.72e-29 | 108 | 99% | Escherichia phage dhabil | Escherichia | INPHARED | PF11634 | phrog_4363 |
MN850622_00057 | 88.421 | 2.65e-52 | 167 | 100% | Escherichia phage mobillu | Escherichia | INPHARED | PF11634 | phrog_4363 |
MT176424_00148 | 96.842 | 3.13e-59 | 184 | 100% | Citrobacter phage PhiZZ6 | Citrobacter | INPHARED | PF11634 | phrog_4363 |
MT682713_00148 | 98.958 | 4.70e-59 | 184 | 100% | Escherichia phage vB_EcoM_Ozark | Escherichia | INPHARED | PF11634 | phrog_4363 |
MW630116_00184 | 87.368 | 1.60e-52 | 167 | 100% | Escherichia phage vB_EcoM-ZQ3 | Escherichia | INPHARED | PF11634 | phrog_4363 |
MZ170041_00152 | 89.583 | 2.79e-48 | 157 | 100% | Escherichia phage vB_EcoM_FN | Escherichia | INPHARED | PF11634 | phrog_4363 |
MZ234025_00214 | 86.316 | 1.79e-51 | 164 | 100% | Escherichia phage vB_EcoM-172859UKE1 | Escherichia | INPHARED | PF11634 | phrog_4363 |
MZ868638_00121 | 87.368 | 5.60e-52 | 166 | 100% | Escherichia phage vB_EcoM-pEK20 | Escherichia | INPHARED | PF11634 | phrog_4363 |
NP_049749.1 | 100.000 | 4.96e-68 | 189 | 100% | NCBI | PF11634 | phrog_4363 | ||
OK331996_00155 | 90.526 | 7.84e-54 | 171 | 100% | Escherichia phage vB_EcoM-G157lw | Escherichia | INPHARED | PF11634 | phrog_4363 |
OL615012_00146 | 97.895 | 1.98e-59 | 185 | 100% | Shigella phage vB_SboM_Phaginator | Shigella | INPHARED | PF11634 | phrog_4363 |
OL770107_00019 | 56.383 | 1.66e-28 | 107 | 99% | Escherichia phage CLB_P2 | Escherichia | INPHARED | PF11634 | phrog_4363 |
OL960577_00154 | 87.368 | 9.48e-52 | 165 | 100% | Escherichia phage vB_EcoM_SA35RD | Escherichia | INPHARED | PF11634 | phrog_4363 |
ON210139_00132 | 98.947 | 4.69e-60 | 186 | 100% | Escherichia phage EC128 | Escherichia | INPHARED | PF11634 | phrog_4363 |
ON506924_00147 | 97.917 | 8.34e-58 | 181 | 100% | Escherichia phage vB_EcoM_SCS4 | Escherichia | INPHARED | PF11634 | phrog_4363 |
ON528725_00106 | 88.421 | 1.07e-52 | 168 | 100% | Shigella phage ESh15 | Shigella | INPHARED | PF11634 | phrog_4363 |
ON528743_00197 | 88.421 | 7.87e-48 | 155 | 100% | Shigella phage ESh33 | Shigella | INPHARED | PF11634 | phrog_4363 |
ON720975_00049 | 98.947 | 3.09e-60 | 187 | 100% | Salmonella phage GRNsp7 | Salmonella | INPHARED | PF11634 | phrog_4363 |
ON782582_00205 | 89.474 | 1.42e-53 | 170 | 100% | Escherichia phage ECP52 | Escherichia | INPHARED | PF11634 | phrog_4363 |
OP870147_00153 | 87.368 | 6.89e-52 | 166 | 100% | Escherichia phage vB_Eco_F31 | Escherichia | INPHARED | PF11634 | phrog_4363 |
OQ067374_00245 | 87.368 | 1.03e-51 | 165 | 100% | Escherichia phage a20 | Escherichia | INPHARED | PF11634 | phrog_4363 |
OQ174503_00243 | 98.947 | 1.18e-60 | 188 | 100% | Escherichia phage REP4 | Escherichia | INPHARED | PF11634 | phrog_4363 |
OQ349392_00128 | 97.895 | 7.60e-60 | 186 | 100% | Escherichia phage KIT06 | Escherichia | INPHARED | PF11634 | phrog_4363 |
OQ599310_00238 | 87.368 | 1.60e-52 | 167 | 100% | Escherichia phage 55 | Escherichia | INPHARED | PF11634 | phrog_4363 |
OQ703618_00034 | 88.421 | 1.79e-52 | 167 | 100% | Escherichia phage GADS24 | Escherichia | INPHARED | PF11634 | phrog_4363 |
uvig_585812_148 | 70.526 | 5.68e-36 | 126 | 96% | GPD | PF11634 | phrog_4363 |