| APIS family ID | APIS114 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Inhibited defense system | ||||||||||||||
| CLAN ID | CLAN048 | |||||||||||||
| Seed protein property |
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| Phage property |
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| PMID/References | ||||||||||||||
| PDB structures | ; | |||||||||||||
| Pfam domains | ||||||||||||||
| Phrog | phrog_345,phrog_19658,phrog_12556,phrog_10469,phrog_16167,phrog_17247 | |||||||||||||
| Host taxa | ;;;;;; | |||||||||||||
| Gene Location | Start: ; End: ; Strand: | |||||||||||||
| Description | ||||||||||||||
| Note | This family does not have seed protein, but we infer its function is defending Dnd because it belongs to the same clan as family APIS113 which has seed protein. | |||||||||||||
pTM is for the estimate of the TM-score, which is obtained from a pairwise error prediction. The higher pTM score indicates better model quality.
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
| MYVGAANLAR ARNIKPGFFT NDELGECEPL ARLLFAGLWT IADREGRLEY RPKKIKAEVL | 60 |
| PYDDCNIIEL LESLNEKGFI TIYEVDKTKY VQVNNWTKHQ NPHVKEGASN IPAPDQNSTS | 120 |
| TVQEPEKNES SPADSLNLIP DSLNLIPDSL PTAAADEPKA RTDYQGILDE YNATCTKMPK | 180 |
| AEALTDNRRK TINARIKEHG RDAITEVFRY ASQSPHHNGT NDLGWQASFD WLMGPKNFLK | 240 |
| ILEKARSGTP PGQKKLTGAA KFKKVLERGS FEQRGNYGDI DINCEHIPED S | 291 |
| Fam ID | Seed protein | Member count | Model | Alignment |
|---|---|---|---|---|
| APIS114 | IMGVR_UViG_3300031577_000006|3300031577|Ga0316602_1000025150 | 13 | HMM model | Member alignment |
