APIS family ID | APIS150 | |||||||||||||
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Inhibited defense system | TIR-STING | |||||||||||||
CLAN ID | CLAN044 | |||||||||||||
Seed protein property |
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Phage property |
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PMID/References | PMID:36952342 | |||||||||||||
PDB structures | ; | |||||||||||||
Pfam domains | ||||||||||||||
Phrog | phrog_6408,phrog_6408 | |||||||||||||
Host taxa | d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas; | |||||||||||||
Gene Location | Start: 60473; End: 60724; Strand: + | |||||||||||||
Description | Functional screen identifies Atd1, a phage MazG-like suppressor of TIR-STING cell suicide |
Genome accession | Start | End | Strand | Protein ID | Length | Molecular weight | Charge | Isoelectric point | Function | Phrog | PFAM |
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KX822733.1 | 57983 | 58474 | - | APC44377.1 | 163 | 19714.83 | 9.5 | 9.4070 | hypothetical protein | ||
KX822733.1 | 58474 | 58899 | - | APC44378.1 | 141 | 15478.97 | 1.5 | 7.8168 | hypothetical protein | phrog_36050 | |
KX822733.1 | 58901 | 59491 | - | APC44379.1 | 196 | 22685.05 | -2.0 | 5.7256 | lysozyme | phrog_33534 | PF00959.24 |
KX822733.1 | 59466 | 59963 | - | APC44380.1 | 165 | 19513.87 | -2.0 | 5.5785 | hypothetical protein | ||
KX822733.1 | 60040 | 60336 | - | APC44381.1 | 98 | 11455.13 | 1.5 | 8.5403 | hypothetical protein | ||
KX822733.1 | 60473 | 60724 | + | APC44382.1 | 83 | 9596.92 | -5.0 | 4.5577 | hypothetical protein | phrog_6408 ; phrog_6408 | |
KX822733.1 | 60724 | 61263 | + | APC44383.1 | 179 | 20144.06 | -7.0 | 4.7124 | hypothetical protein | phrog_4806 | |
KX822733.1 | 61260 | 61502 | + | APC44384.1 | 80 | 9374.04 | 1.5 | 7.9922 | hypothetical protein | ||
KX822733.1 | 61553 | 62914 | + | APC44385.1 | 453 | 51698.21 | 10.5 | 8.2062 | DNA helicase | PF05970.19 ;PF13604.11 | |
KX822733.1 | 62924 | 63544 | + | APC44386.1 | 206 | 23481.81 | 6.0 | 8.8725 | hypothetical protein | phrog_768 | |
KX822733.1 | 63546 | 63761 | + | APC44387.1 | 71 | 8117.31 | -7.0 | 3.8261 | hypothetical protein |
pTM is for the estimate of the TM-score, which is obtained from a pairwise error prediction. The higher pTM score indicates better model quality.
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Hit | Query start | Query end | Hit start | Hit end | TMscore(ali) | TMscore(avg) |
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MGYP003555081414.pdb | 15 | 83 | 10 | 79 | 0.8536 | 0.7264 |
Fam ID | Seed protein | Member count | Model | Alignment | APIS150 | APC44382.1 | 192 | HMM model | Member alignment |
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