| APIS family ID | APIS164 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Inhibited defense system | AVAST (Antiviral STAND) | |||||||||||||
| CLAN ID | CLAN061 | |||||||||||||
| Seed protein property |
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| Phage property |
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| PMID/References | PMID:35951700 | |||||||||||||
| PDB structures | ; | |||||||||||||
| Pfam domains | ||||||||||||||
| Phrog | ||||||||||||||
| Host taxa | d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia; | |||||||||||||
| Gene Location | Start: 5056; End: 5571; Strand: + | |||||||||||||
| Description | Lidtsur-17 inhibits SeAvs3 nuclease activity in vitro. | |||||||||||||
| Genome accession | Start | End | Strand | Protein ID | Length | Molecular weight | Charge | Isoelectric point | Function | Phrog | PFAM |
|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_048177.1 | 3666 | 3998 | + | YP_009821610.1 | 110 | 12711.47 | -4.5 | 4.8624 | hypothetical protein | ||
| NC_048177.1 | 4001 | 4315 | + | YP_009821611.1 | 104 | 11050.83 | -3.0 | 4.9329 | hypothetical protein | ||
| NC_048177.1 | 4323 | 4472 | + | YP_009821612.1 | 49 | 5413.06 | 2.5 | 8.0389 | hypothetical protein | ||
| NC_048177.1 | 4478 | 4765 | + | YP_009821613.1 | 95 | 10084.16 | -6.5 | 4.4567 | hypothetical protein | phrog_18383 | |
| NC_048177.1 | 4767 | 5066 | + | YP_009821614.1 | 99 | 11304.71 | -1.0 | 5.7132 | hypothetical protein | phrog_34944 | |
| NC_048177.1 | 5056 | 5571 | + | YP_009821615.1 | 171 | 18833.61 | -5.0 | 5.0008 | hypothetical protein | ||
| NC_048177.1 | 5725 | 5964 | + | YP_009821616.1 | 79 | 8651.64 | -8.0 | 3.8880 | hypothetical protein | phrog_27504 | |
| NC_048177.1 | 6033 | 6233 | + | YP_009821617.1 | 66 | 7098.70 | 3.0 | 9.6611 | hypothetical protein | ||
| NC_048177.1 | 6227 | 6679 | + | YP_009821618.1 | 150 | 17111.32 | 3.5 | 8.4584 | hypothetical protein | ||
| NC_048177.1 | 6676 | 7389 | + | YP_009821619.1 | 237 | 27001.64 | 10.0 | 8.4883 | DNA primase | phrog_8634 | |
| NC_048177.1 | 7399 | 8664 | + | YP_009821620.1 | 421 | 46839.35 | -2.5 | 6.0657 | AAA family ATPase | PF03796.20 ;PF13481.11 |
pTM is for the estimate of the TM-score, which is obtained from a pairwise error prediction. The higher pTM score indicates better model quality.
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
| Fam ID | Seed protein | Member count | Model | Alignment | APIS164 | YP_009821615.1 | 9 | HMM model | Member alignment |
|---|
| Member | pident | evalue | bitscore | qcovs | phage | host | SourceDB | Pfam | Phrog |
|---|---|---|---|---|---|---|---|---|---|
| KM247287_00009 | 64.700 | 5.527E-67 | 221 | 1.000% | Escherichia phage J8-65 | Escherichia | INPHARED | phrog_ | |
| YP_009821615.1 | 100.000 | 9.766E-110 | 344 | 1.000% | Escherichia phage Lidtsur | Escherichia | NCBI | phrog_ | |
| MN850625_00028 | 63.900 | 9.447E-66 | 217 | 1.000% | Escherichia phage smaasur | Escherichia | INPHARED | phrog_ | |
| MW250275_00016 | 46.400 | 3.009E-41 | 147 | 1.000% | Kosakonia virus Kc261 | Kosakonia | INPHARED | phrog_ | |
| MN850624_00039 | 46.800 | 8.539E-42 | 148 | 1.000% | Escherichia phage usur | Escherichia | INPHARED | phrog_ | |
| MN850568_00024 | 45.200 | 6.346E-39 | 140 | 0.988% | Escherichia phage altidsur | Escherichia | INPHARED | phrog_ | |
| MN850608_00014 | 47.500 | 3.320E-42 | 149 | 0.988% | Escherichia phage megetsur | Escherichia | INPHARED | phrog_ | |
| IMGVR_UViG_2751185941_000001|2751185941|2753970803 | 46.500 | 1.060E-40 | 145 | 0.988% | Enterobacter bugandensis | IMGVR | phrog_ | ||
| MN850592_00030 | 45.500 | 2.468E-39 | 141 | 0.988% | Escherichia phage aldrigsur | Escherichia | INPHARED | phrog_ |