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Seed proteins  | Seed genomic context  | Seed protein 3D structures  |  Structural homologs  |  Family infomation  | Homology to other families  | Family members, sources, and their hosts  

Seed protein information help

APIS family ID APIS193
Inhibited defense system AVAST (Antiviral STAND)
CLAN ID CLAN053
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
QHR71835.1 gene_page: Forsur-7 102 10939.12 3.7758 -14.5
Phage property
Phage Assembly id
Escherichia phage forsur GCA_010120305.1
PMID/References PMID:35951700
PDB structures ;
Pfam domains
Phrog
Host taxa d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;
Gene Location Start: 29791;  End: 30099;  Strand: +
Description Forsur-7 inhibits SeAvs3 nuclease activity in vitro to a lesser degree.

Seed genomic context      Download table help

Genome accession Start End Strand Protein ID Length Molecular weight Charge Isoelectric point Function Phrog PFAM
MN850617.1 27452 27844 + QHR71830.1 130 14736.83 -6.5 4.3216 anti-restriction SAMase phrog_2226
MN850617.1 28067 28594 + QHR71831.1 175 19335.98 2.5 7.1304 hypothetical protein phrog_1448
MN850617.1 28668 28952 + QHR71832.1 94 10363.45 -11.0 4.1943 hypothetical protein
MN850617.1 29172 29453 + QHR71833.1 93 9623.84 -11.0 3.7722 hypothetical protein
MN850617.1 29492 29722 + QHR71834.1 76 8549.47 -10.0 3.9437 hypothetical protein
MN850617.1 29791 30099 + QHR71835.1 102 10939.12 -14.5 3.7758 hypothetical protein
MN850617.1 30099 30212 + QHR71836.1 37 3964.76 3.5 9.9225 hypothetical protein
MN850617.1 30209 30385 + QHR71837.1 58 6249.30 4.0 8.7107 hypothetical protein
MN850617.1 30613 30951 + QHR71838.1 112 12620.42 -9.5 4.1644 hypothetical protein
MN850617.1 30955 31269 + QHR71839.1 104 11180.00 -1.5 5.9475 hypothetical protein
MN850617.1 31278 31529 + QHR71840.1 83 9312.36 -8.0 4.2178 hypothetical protein

Seed genomic context- JBrowse     

Predicted 3D structure by alphafold2 with pTM = 0.29 Download help

pTM is for the estimate of the TM-score, which is obtained from a pairwise error prediction. The higher pTM score indicates better model quality.

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Structural homologs

No homologs found in AlphaFold database

No homologs found in esmfold database

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS193 QHR71835.1 4 HMM model Member alignment

Host Taxa distribution

Length distribution

Homology to other families       help

Clan ID: CLAN053

APIS193 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_2228664000_000004|2228664000|2228666510 48.700 2.804E-21 85 0.882% IMGVR phrog_
IMGVR_UViG_3300000060_000001|3300000060|PaMGMunAill_000003845 48.700 2.804E-21 85 0.882% IMGVR phrog_
QHR71835.1 100.000 6.319E-59 194 1.000% Escherichia phage forsur Escherichia NCBI phrog_
MN850583_00007 89.200 2.238E-58 192 1.000% Escherichia phage glasur Escherichia INPHARED phrog_