PUL ID |
PUL0068 |
PubMed |
8277949, Mol Gen Genet. 1994 Jan;242(1):90-9. doi: 10.1007/BF00277352. |
Characterization method |
enzyme activity assay,electrophoretic mobility shift assay |
Genomic accession number |
AM886293.1 |
Nucelotide position range |
23902-29914 |
Substrate |
raffinose |
Loci |
rafRABD |
Species |
Escherichia coli/562 |
Degradation or Biosynthesis |
degradation |
Gene Name |
Locus Tag |
Protein ID |
Gene Position |
GenBank Contig Range |
EC Number |
RafR | IPF_354 | CAP07693.1 | 10 - 1021 (+) | AM886293.1:23912-24923 | - |
RafA | IPF_353 | CAP07694.1 | 1116 - 3243 (+) | AM886293.1:25018-27145 | - |
RafB | IPF_349 | CAP07695.1 | 3305 - 4583 (+) | AM886293.1:27207-28485 | - |
RafD | IPF_347 | CAP07696.1 | 4582 - 6013 (+) | AM886293.1:28484-29915 | - |
Cluster number |
1 | ||
Gene name |
Gene position |
Gene type |
Found by CGCFinder? |
RafR | 11 - 1021 (+) | TF: DBD-Pfam|LacI,DBD-SUPERFAMILY|0036955 | No |
RafA | 1117 - 3243 (+) | CAZyme: GH36 | Yes |
RafB | 3306 - 4583 (+) | TC: gnl|TC-DB|P16552|2.A.1.5.2 | Yes |
RafD | 4583 - 6013 (+) | CAZyme: GH32 | Yes |
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