PUL ID |
PUL0109 |
PubMed |
31275257, Front Microbiol. 2019 Jun 7;10:1286. doi: 10.3389/fmicb.2019.01286. eCollection 2019. |
Characterization method |
fosmid library screen,lectin binding assay |
Genomic accession number |
LR131277.1 |
Nucelotide position range |
26-32565 |
Substrate |
O-glycan,N-glycan |
Loci |
VDS02463.1-VDS02489.1 |
Species |
uncultured bacterium/77133 |
Degradation or Biosynthesis |
degradation |
Cluster number |
1 | ||
Gene name |
Gene position |
Gene type |
Found by CGCFinder? |
- | 27 - 173 (+) | CDS | No |
- | 178 - 2442 (+) | CDS | No |
- | 2689 - 3168 (+) | CDS | No |
- | 3160 - 3273 (-) | CDS | No |
- | 3295 - 3522 (+) | CDS | No |
- | 3656 - 4108 (+) | CDS | No |
- | 4170 - 4718 (+) | CDS | No |
- | 4768 - 5445 (+) | TF: DBD-Pfam|Trans_reg_C | No |
- | 5442 - 6731 (+) | STP: STP|HisKA | No |
- | 6824 - 7264 (+) | CDS | No |
- | 7304 - 7804 (+) | CDS | No |
- | 7892 - 9103 (-) | CDS | No |
- | 9160 - 11697 (-) | CDS | No |
- | 13297 - 16026 (+) | CDS | No |
- | 16074 - 16412 (-) | CDS | No |
- | 16570 - 16689 (+) | CDS | No |
- | 16849 - 17139 (+) | CDS | No |
- | 17531 - 18067 (+) | CDS | No |
- | 18064 - 19173 (+) | CDS | No |
- | 19180 - 20235 (-) | CDS | No |
- | 20547 - 21569 (+) | CDS | No |
- | 21572 - 22315 (+) | TC: gnl|TC-DB|P42332|3.A.1.131.1 | Yes |
- | 22308 - 23264 (+) | other | Yes |
- | 23927 - 26464 (+) | CAZyme: GH2 | Yes |
- | 26511 - 29624 (-) | TC: gnl|TC-DB|Q93N33|2.A.21.9.2 | Yes |
- | 29805 - 30509 (-) | CDS | No |
- | 30691 - 31239 (+) | STP: STP|Sigma70_r2,STP|Sigma70_r4_2 | No |
- | 31240 - 32565 (+) | CDS | No |
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