PUL ID |
PUL0182 |
PubMed |
27058293, Carbohydr Res. 2016 May 13;426:26-32. doi: 10.1016/j.carres.2016.03.011. Epub 2016 Mar 29. |
Characterization method |
NMR,sugar utilization assay |
Genomic accession number |
AB811608 |
Nucelotide position range |
434-13616 |
Substrate |
O-antigen |
Loci |
galF-orf1-wegS-wzx-orf4-wzy-orf6-gnd |
Species |
Escherichia coli/562 |
Degradation or Biosynthesis |
biosynthesis |
Gene Name |
Locus Tag |
Protein ID |
Gene Position |
GenBank Contig Range |
EC Number |
wcaM | - | BAQ00752.1 | 434 - 1826 (+) | AB811608.1:868-2260 | - |
galF | - | BAQ00753.1 | 1960 - 2869 (+) | AB811608.1:2394-3303 | - |
- | - | BAQ00754.1 | 3045 - 3873 (+) | AB811608.1:3479-4307 | - |
- | - | BAQ00755.1 | 3895 - 4288 (+) | AB811608.1:4329-4722 | - |
wzx | - | BAQ00756.1 | 4306 - 5566 (+) | AB811608.1:4740-6000 | - |
- | - | BAQ00757.1 | 5547 - 6471 (+) | AB811608.1:5981-6905 | - |
wzy | - | BAQ00758.1 | 6467 - 7688 (+) | AB811608.1:6901-8122 | - |
- | - | BAQ00759.1 | 7680 - 8859 (+) | AB811608.1:8114-9293 | - |
gnd | - | BAQ00760.1 | 9007 - 10414 (+) | AB811608.1:9441-10848 | - |
ugd | - | BAQ00761.1 | 10646 - 11813 (+) | AB811608.1:11080-12247 | - |
wzz | - | BAQ00762.1 | 11958 - 12957 (+) | AB811608.1:12392-13391 | - |
hisI | - | BAQ00763.1 | 13016 - 13616 (-) | AB811608.1:13450-14050 | - |
Cluster number |
0 | ||
Gene name |
Gene position |
Gene type |
Found by CGCFinder? |
- | 435 - 1826 (+) | CDS | No |
- | 1961 - 2869 (+) | CDS | No |
- | 3046 - 3873 (+) | CDS | No |
- | 3896 - 4288 (+) | CDS | No |
- | 4307 - 5566 (+) | CAZyme: GT2|GT2_Glycos_transf_2 | No |
- | 5548 - 6471 (+) | CDS | No |
- | 6468 - 7688 (+) | CDS | No |
- | 7681 - 8859 (+) | CDS | No |
- | 9008 - 10414 (+) | CDS | No |
- | 10647 - 11813 (+) | CDS | No |
- | 11959 - 12957 (+) | CDS | No |
- | 13017 - 13616 (-) | CDS | No |
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