PUL ID |
PUL0232 |
PubMed |
24705323, Appl Environ Microbiol. 2014 Jun;80(12):3604-14. doi: 10.1128/AEM.00130-14. |
Characterization method |
microarray,electrophoretic mobility shift assay |
Genomic accession number |
CP000303.1 |
Nucelotide position range |
2337397-2344915 |
Substrate |
raffinose |
Loci |
bbr_1865-bbr_1870 |
Species |
Bifidobacterium breve/1685 |
Degradation or Biosynthesis |
degradation |
Gene Name |
Locus Tag |
Protein ID |
Gene Position |
GenBank Contig Range |
EC Number |
- | Bbr_1865 | ABE96527.1 | 0 - 867 (-) | CP000303.1:2337397-2338264 | - |
- | Bbr_1866 | ABE96528.1 | 885 - 1833 (-) | CP000303.1:2338282-2339230 | - |
- | Bbr_1867 | ABE96529.1 | 1854 - 3144 (-) | CP000303.1:2339251-2340541 | - |
- | Bbr_1868 | ABE96530.1 | 3316 - 4525 (+) | CP000303.1:2340713-2341922 | - |
aga | Bbr_1869 | ABE96531.1 | 4637 - 6953 (-) | CP000303.1:2342034-2344350 | 3.2.1.22 |
mesJ | Bbr_1870 | ABE96532.1 | 7069 - 7519 (-) | CP000303.1:2344466-2344916 | 3.5.4.- |
Cluster number |
1 | ||
Gene name |
Gene position |
Gene type |
Found by CGCFinder? |
- | 1 - 867 (-) | TC: gnl|TC-DB|Q00751|3.A.1.1.28 | Yes |
- | 886 - 1833 (-) | TC: gnl|TC-DB|Q00750|3.A.1.1.28 | Yes |
- | 1855 - 3144 (-) | TC: gnl|TC-DB|Q00749|3.A.1.1.28 | Yes |
- | 3317 - 4525 (+) | other | Yes |
aga | 4638 - 6953 (-) | CAZyme: GH36 | Yes |
mesJ | 7070 - 7519 (-) | CDS | No |
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