dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_00998
Location and strand information: 25600 - 27027 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1113
Protein molecular weight: 55218.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_00999
Location and strand information: 27200 - 28609 (+)
Family: null
Protein type: null
Protein description: Glutamate decarboxylase

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01000
Location and strand information: 28658 - 29575 (-)
Family: 8.A.5.1.7
Protein type: TC
Protein description: Oxidoreductase YdhF

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01001
Location and strand information: 30489 - 31343 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01002
Location and strand information: 31582 - 31938 (+)
Family: 3.A.1.2.17
Protein type: TC
Protein description: Galactose/methyl galactoside import ATP-binding protein MglA

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01003
Location and strand information: 31938 - 33089 (+)
Family: 3.A.1.2.20
Protein type: TC
Protein description: Xylose import ATP-binding protein XylG

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01004
Location and strand information: 33093 - 34097 (+)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01005
Location and strand information: 34097 - 35359 (+)
Family: 3.A.1.2.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01006
Location and strand information: 35455 - 36666 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01007
Location and strand information: 36795 - 37106 (-)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01008
Location and strand information: 37334 - 38512 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01009
Location and strand information: 38598 - 39611 (-)
Family: 3.A.1.2.1
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrD

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01010
Location and strand information: 39614 - 40615 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01011
Location and strand information: 40637 - 42139 (-)
Family: 3.A.1.2.20
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01012
Location and strand information: 42451 - 43902 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01013
Location and strand information: 43985 - 45535 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01014
Location and strand information: 45532 - 47370 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01015
Location and strand information: 47657 - 49456 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01016
Location and strand information: 49607 - 56629 (-)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6011
Protein molecular weight: 258139.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01017
Location and strand information: 56729 - 62962 (-)
Family: CBM67|CBM32|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7907
Protein molecular weight: 227808.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01018
Location and strand information: 63059 - 68572 (-)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9105
Protein molecular weight: 202158.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_29|CGC2
Gene ID: MGYG000001063_01019
Location and strand information: 68721 - 75374 (-)
Family: CBM67|CBM32|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6927
Protein molecular weight: 243200.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001063_00998
MGYG000001063_01016	GH78_e47\|CBM67_e0\|3.2.1.40\|3.1.1.73	alpha-rhamnoside
MGYG000001063_01017	GH78_e15\|CBM67_e7\|CBM32_e58\|3.2.1.40	alpha-rhamnoside
MGYG000001063_01018	GH78_e47\|CBM67_e0\|3.2.1.40\|3.1.1.73	alpha-rhamnoside
MGYG000001063_01019

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-rhamnoside

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001063_00998	hypothetical protein	CAZyme	25600	27027	+	GH29
MGYG000001063_00999	Glutamate decarboxylase	null	27200	28609	+	Pyridoxal_deC
MGYG000001063_01000	Oxidoreductase YdhF	TC	28658	29575	-	8.A.5.1.7
MGYG000001063_01001	HTH-type transcriptional activator RhaR	TF	30489	31343	-	HTH_AraC+HTH_AraC
MGYG000001063_01002	Galactose/methyl galactoside import ATP-binding protein MglA	TC	31582	31938	+	3.A.1.2.17
MGYG000001063_01003	Xylose import ATP-binding protein XylG	TC	31938	33089	+	3.A.1.2.20
MGYG000001063_01004	Ribose import permease protein RbsC	TC	33093	34097	+	3.A.1.2.9
MGYG000001063_01005	hypothetical protein	TC	34097	35359	+	3.A.1.2.8
MGYG000001063_01006	hypothetical protein	null	35455	36666	+	Peripla_BP_4
MGYG000001063_01007	L-rhamnose mutarotase	null	36795	37106	-	rhaM
MGYG000001063_01008	hypothetical protein	TC	37334	38512	-	3.A.1.2.9
MGYG000001063_01009	Autoinducer 2 import system permease protein LsrD	TC	38598	39611	-	3.A.1.2.1
MGYG000001063_01010	Ribose import permease protein RbsC	TC	39614	40615	-	3.A.1.2.9
MGYG000001063_01011	Ribose import ATP-binding protein RbsA	TC	40637	42139	-	3.A.1.2.20
MGYG000001063_01012	Chemotaxis response regulator protein-glutamate methylesterase	TF	42451	43902	+	HTH_AraC
MGYG000001063_01013	HTH-type transcriptional activator RhaR	TF	43985	45535	+	HTH_AraC+HTH_AraC
MGYG000001063_01014	hypothetical protein	TC	45532	47370	+	8.A.59.2.1
MGYG000001063_01015	hypothetical protein	null	47657	49456	-	NLPC_P60
MGYG000001063_01016	hypothetical protein	CAZyme	49607	56629	-	CBM67\| GH78
MGYG000001063_01017	hypothetical protein	CAZyme	56729	62962	-	CBM67\| CBM32\| GH78
MGYG000001063_01018	hypothetical protein	CAZyme	63059	68572	-	CBM67\| GH78
MGYG000001063_01019	hypothetical protein	CAZyme	68721	75374	-	CBM67\| CBM32\| GH78
Protein ID	Protein Name	Type	Start	End	Strand	Signature