PlantCAZyme

Basic Information
Species	Physcomitrella patens
Cazyme ID	Pp1s210_72V6.1
Family	GH105
Protein Properties	Length: 407 Molecular Weight: 46250.4 Isoelectric Point: 9.6242
Chromosome	Chromosome/Scaffold: 210 Start: 511806 End: 513176
Description
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH105	56	396	0
AKDRFQYELGVYLAGIELVWEATGDSKYFDYIKFKVDRHVMDNGTIAGNYNLTEFNIDNIMTGRLVLMLYKKTGDRKYKIAADILRKQLRQHPRIREGGF WHKLVYPYQMWLDGLYMAQPFYAEYAKLFHEATVFDDVASQFIIMERRSRDFTTGLLYHGYDESRVQNWSDPKTGRSPSFWGRAMGWYFMAIVDTLDIIP KHHPKRAHLLAITRNIAVALTKVQDSKSGLWWQVLDKPNQKGNYLESSASAMFVYSYAKGVRKGYLPPKYLKIAKQGYAGIVSNFITGTADGGVNYNRIA SVGGLGGTPYRNGTFEYYISEPIATNDPKGVGPFMMCSVEM

Full Sequence
Protein Sequence Length: 407 Download
MKFSHELPIV EVGIVILCLG LWMPIARATH GEVEALDLAK RMAMTSMKEW SVVGPAKDRF 60 QYELGVYLAG IELVWEATGD SKYFDYIKFK VDRHVMDNGT IAGNYNLTEF NIDNIMTGRL 120 VLMLYKKTGD RKYKIAADIL RKQLRQHPRI REGGFWHKLV YPYQMWLDGL YMAQPFYAEY 180 AKLFHEATVF DDVASQFIIM ERRSRDFTTG LLYHGYDESR VQNWSDPKTG RSPSFWGRAM 240 GWYFMAIVDT LDIIPKHHPK RAHLLAITRN IAVALTKVQD SKSGLWWQVL DKPNQKGNYL 300 ESSASAMFVY SYAKGVRKGY LPPKYLKIAK QGYAGIVSNF ITGTADGGVN YNRIASVGGL 360 GGTPYRNGTF EYYISEPIAT NDPKGVGPFM MCSVEMSYAS VSMRRP*

Full Sequence

Protein Sequence Length: 407 Download

MKFSHELPIV EVGIVILCLG LWMPIARATH GEVEALDLAK RMAMTSMKEW SVVGPAKDRF    60
QYELGVYLAG IELVWEATGD SKYFDYIKFK VDRHVMDNGT IAGNYNLTEF NIDNIMTGRL    120
VLMLYKKTGD RKYKIAADIL RKQLRQHPRI REGGFWHKLV YPYQMWLDGL YMAQPFYAEY    180
AKLFHEATVF DDVASQFIIM ERRSRDFTTG LLYHGYDESR VQNWSDPKTG RSPSFWGRAM    240
GWYFMAIVDT LDIIPKHHPK RAHLLAITRN IAVALTKVQD SKSGLWWQVL DKPNQKGNYL    300
ESSASAMFVY SYAKGVRKGY LPPKYLKIAK QGYAGIVSNF ITGTADGGVN YNRIASVGGL    360
GGTPYRNGTF EYYISEPIAT NDPKGVGPFM MCSVEMSYAS VSMRRP* 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam07470	Glyco_hydro_88	4.0e-103	39	396	360	+ Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225	COG4225	6.0e-110	41	396	366	+ Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
RefSeq	XP_001756707.1	0	47	402	1	356	predicted protein [Physcomitrella patens subsp. patens]
RefSeq	XP_001760573.1	0	47	396	1	350	predicted protein [Physcomitrella patens subsp. patens]
RefSeq	XP_001763702.1	0	47	400	1	352	predicted protein [Physcomitrella patens subsp. patens]
RefSeq	XP_001775466.1	0	53	397	1	345	predicted protein [Physcomitrella patens subsp. patens]
RefSeq	XP_001776763.1	0	47	406	1	360	predicted protein [Physcomitrella patens subsp. patens]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	2d8l_A	0	36	397	14	365	A Chain A, Arabidopsis Thaliana Peroxidase N
PDB	1nc5_A	0	36	397	14	365	A Chain A, Structure Of Protein Of Unknown Function Of Yter From Bacillus Subtilis
PDB	2gh4_A	0	36	397	4	355	A Chain A, YterD143NDGALA-Rha
PDB	3pmm_A	1e-21	60	395	66	376	A Chain A, The Crystal Structure Of A Possible Member Of Gh105 Family From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578
PDB	3qwt_D	1e-20	144	395	142	375	A Chain A, The Crystal Structure Of A Possible Member Of Gh105 Family From Salmonella Enterica Subsp. Enterica Serovar Paratyphi A Str. Atcc 9150

Transmembrane Domains

Start	End
7	26

EST Download unfiltered results here

Hit	Length	Start	End	EValue
BY952867	202	1	202	0
BJ586628	220	181	400	0
FC344866	196	202	397	0
BJ611477	213	188	400	0
BY983743	166	1	166	0

Orthologous Group
Species	ID
Physcomitrella patens	Pp1s43_51V6.1	Pp1s192_4V6.2	Pp1s192_4V6.1	Pp1s62_191V6.2	Pp1s62_191V6.1
	Pp1s23_318V6.1
Ricinus communis	30936.m000030	51000.m000023

CAZyme Information