| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s23_318V6.1 |
| Family | GH105 |
| Protein Properties | Length: 420 Molecular Weight: 46793.1 Isoelectric Point: 5.4497 |
| Chromosome | Chromosome/Scaffold: 23 Start: 2306304 End: 2308204 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH105 | 73 | 413 | 0 |
| KDRFQYELGTILRGIELVHEATQKENYLDYIKYKVDRFVYDDGTITSYVLDEFQLDSILTGRLLLTLFKATGANKYKTAADLLREQLRKQPRTHEGGFWH KNVYPYQIWLDGLYMAEPFYAQYAMEFKEDDDFDDIAAQFIITEKRMRDSKTGLLYHGYDESRVETWSDPVTGCSPSIWGRGVGWFTMALVDTLDYFPDH HPKRPELLAILIRIAVAVKSVQDPQSGLWWEVMDKGGDAGNYLESSASAMFVYSLAKGVRLGYLTKGQFHESVLSGYDGIVSHFVQVASDGGVSYTGTVS VGGLGGNPYRNGSYAYYLSEEVVSNDPKGVGSFLMASVENL | |||
| Full Sequence |
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| Protein Sequence Length: 420 Download |
| MRIVESEAMG GALVSGKWSR GSTLRVLAAV GFVVVMLRMP VAVAHVTGQQ ALVYTEQMAT 60 MSMNLWKVTG PGKDRFQYEL GTILRGIELV HEATQKENYL DYIKYKVDRF VYDDGTITSY 120 VLDEFQLDSI LTGRLLLTLF KATGANKYKT AADLLREQLR KQPRTHEGGF WHKNVYPYQI 180 WLDGLYMAEP FYAQYAMEFK EDDDFDDIAA QFIITEKRMR DSKTGLLYHG YDESRVETWS 240 DPVTGCSPSI WGRGVGWFTM ALVDTLDYFP DHHPKRPELL AILIRIAVAV KSVQDPQSGL 300 WWEVMDKGGD AGNYLESSAS AMFVYSLAKG VRLGYLTKGQ FHESVLSGYD GIVSHFVQVA 360 SDGGVSYTGT VSVGGLGGNP YRNGSYAYYL SEEVVSNDPK GVGSFLMASV ENLRVSLSD* 420 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07470 | Glyco_hydro_88 | 1.0e-85 | 66 | 414 | 350 | + Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases. | ||
| COG4225 | COG4225 | 2.0e-91 | 50 | 416 | 367 | + Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001756707.1 | 0 | 63 | 419 | 1 | 357 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001760573.1 | 0 | 63 | 416 | 1 | 354 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001763702.1 | 0 | 63 | 414 | 1 | 350 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001775466.1 | 0 | 70 | 415 | 2 | 347 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001776763.1 | 0 | 63 | 418 | 1 | 356 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2d8l_A | 0 | 49 | 411 | 11 | 363 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1nc5_A | 0 | 49 | 411 | 11 | 363 | A Chain A, Structure Of Protein Of Unknown Function Of Yter From Bacillus Subtilis |
| PDB | 2gh4_A | 0 | 49 | 411 | 1 | 353 | A Chain A, YterD143NDGALA-Rha |
| PDB | 3k11_A | 2e-16 | 78 | 415 | 82 | 413 | A Chain A, Crystal Structure Of Putative Glycosyl Hydrolase (Np_813087.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 1.80 A Resolution |
| PDB | 3qwt_D | 0.00000000000003 | 159 | 356 | 142 | 332 | A Chain A, The Crystal Structure Of A Possible Member Of Gh105 Family From Salmonella Enterica Subsp. Enterica Serovar Paratyphi A Str. Atcc 9150 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FC439813 | 231 | 1 | 231 | 0 |
| BY982426 | 194 | 1 | 194 | 0 |
| BY989271 | 223 | 27 | 245 | 0 |
| BJ966218 | 205 | 1 | 201 | 0 |
| BJ865962 | 227 | 136 | 362 | 0 |
| Orthologous Group | |||||
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| Species | ID | ||||
| Physcomitrella patens | Pp1s210_72V6.1 | Pp1s43_51V6.1 | Pp1s192_4V6.2 | Pp1s192_4V6.1 | Pp1s62_191V6.2 |
| Pp1s62_191V6.1 | |||||
| Ricinus communis | 30936.m000030 | 51000.m000023 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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