| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s43_51V6.1 |
| Family | GH105 |
| Protein Properties | Length: 421 Molecular Weight: 47177 Isoelectric Point: 6.6406 |
| Chromosome | Chromosome/Scaffold: 43 Start: 379695 End: 382191 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH105 | 75 | 417 | 0 |
| PAKDRFQYELGVFLRGVELLSETTQDQKYLDFIKFKIDRFVTDNGTINTYKFNEFQLDSILTGRLLLTLFKSTGALKYKTAADILREQLRKQPRTNEGGF WHKDVYPYQMWLDGLYMAEPYYARYAKEFDDRSAFDDIAAQFIIMENRTRNETTGLLYHGYDEARVQAWADPLTGCSPSIWGRSVGWFAMGVLDTLEFFP VDHPKRSEMVAILNRIASAVKRFQDAQSGLWWQVMDKGGEAGNYLESSASAMFVYTLAKGIRLAYLSKDDYLDSALKGYDGIVAHFVDSGPDGGVNYLRT VSVGGLGGKPYRDGSYEYYLSEAVVTNDPKGIGPFIMACVEIF | |||
| Full Sequence |
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| Protein Sequence Length: 421 Download |
| MKMVGGEVIA KILATSRHHR IVLLKVFAFV ALITVLFAAT LAIAPAMEHV SGQQALDFAK 60 QMGVTSMSLW NVTGPAKDRF QYELGVFLRG VELLSETTQD QKYLDFIKFK IDRFVTDNGT 120 INTYKFNEFQ LDSILTGRLL LTLFKSTGAL KYKTAADILR EQLRKQPRTN EGGFWHKDVY 180 PYQMWLDGLY MAEPYYARYA KEFDDRSAFD DIAAQFIIME NRTRNETTGL LYHGYDEARV 240 QAWADPLTGC SPSIWGRSVG WFAMGVLDTL EFFPVDHPKR SEMVAILNRI ASAVKRFQDA 300 QSGLWWQVMD KGGEAGNYLE SSASAMFVYT LAKGIRLAYL SKDDYLDSAL KGYDGIVAHF 360 VDSGPDGGVN YLRTVSVGGL GGKPYRDGSY EYYLSEAVVT NDPKGIGPFI MACVEIFRVS 420 * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07470 | Glyco_hydro_88 | 7.0e-96 | 70 | 418 | 350 | + Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases. | ||
| COG4225 | COG4225 | 8.0e-104 | 73 | 420 | 348 | + Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001756707.1 | 0 | 67 | 420 | 1 | 354 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001760573.1 | 0 | 67 | 420 | 1 | 354 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001763702.1 | 0 | 67 | 418 | 1 | 350 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001775466.1 | 0 | 74 | 419 | 2 | 347 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001776763.1 | 0 | 67 | 416 | 1 | 350 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2d8l_A | 0 | 48 | 416 | 6 | 364 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 1nc5_A | 0 | 48 | 416 | 6 | 364 | A Chain A, Structure Of Protein Of Unknown Function Of Yter From Bacillus Subtilis |
| PDB | 2gh4_A | 0 | 53 | 416 | 1 | 354 | A Chain A, YterD143NDGALA-Rha |
| PDB | 3k11_A | 5e-16 | 82 | 419 | 82 | 413 | A Chain A, Crystal Structure Of Putative Glycosyl Hydrolase (Np_813087.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 1.80 A Resolution |
| PDB | 3qwt_D | 0.000000000000001 | 163 | 364 | 142 | 336 | A Chain A, The Crystal Structure Of A Possible Member Of Gh105 Family From Salmonella Enterica Subsp. Enterica Serovar Paratyphi A Str. Atcc 9150 |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
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| Start | End | ||||
| 21 | 43 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| BY989271 | 223 | 27 | 249 | 0 |
| BJ966218 | 221 | 1 | 221 | 0 |
| CJ972277 | 187 | 1 | 186 | 0 |
| BJ974739 | 172 | 250 | 421 | 0 |
| BJ593803 | 164 | 258 | 421 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Physcomitrella patens | Pp1s210_72V6.1 | Pp1s192_4V6.2 | Pp1s192_4V6.1 | Pp1s62_191V6.2 | Pp1s62_191V6.1 |
| Pp1s23_318V6.1 | |||||
| Ricinus communis | 30936.m000030 | 51000.m000023 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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