| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 105243 |
| Family | GH28 |
| Protein Properties | Length: 470 Molecular Weight: 51542.2 Isoelectric Point: 6.74 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH28 | 73 | 394 | 0 |
| ARASSLHFPPGKYLTGAVFLASNMAVVIDPGAIILGSSRQEDYPRERSRWYVLAAENAVNVSVTGGGIIDGRGLEFVSRFWSRKNVMVSWNTTGACIGDE CRPRLLGFVNCENVRVWNIHLRQPAYWSLHVANSSGIYIHDITLYGDFNTPNNDGIDIDGSNNTYITNCRLDTADDGIVVKSIAGPVSNVSVTNSWIRSK SCAVKIGSETYHDLDGLYFDSITIVESHRGLGVQLRDKGNIFNVTFSNIVLSTRLYDPLWWGRAEPIYVTACPRNLSTSVGTIDSVRFINISSSAENGIF LAGSDGGVLNRLELSNVSVRLG | |||
| Full Sequence |
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| Protein Sequence Length: 470 Download |
| MGISGIVILF AAIFLSSQSQ CAISSSSARN FPLLLDHGHR WVCNVLDFGA VADGKTIDTS 60 AIQSAIDYCA WKARASSLHF PPGKYLTGAV FLASNMAVVI DPGAIILGSS RQEDYPRERS 120 RWYVLAAENA VNVSVTGGGI IDGRGLEFVS RFWSRKNVMV SWNTTGACIG DECRPRLLGF 180 VNCENVRVWN IHLRQPAYWS LHVANSSGIY IHDITLYGDF NTPNNDGIDI DGSNNTYITN 240 CRLDTADDGI VVKSIAGPVS NVSVTNSWIR SKSCAVKIGS ETYHDLDGLY FDSITIVESH 300 RGLGVQLRDK GNIFNVTFSN IVLSTRLYDP LWWGRAEPIY VTACPRNLST SVGTIDSVRF 360 INISSSAENG IFLAGSDGGV LNRLELSNVS VRLGRITDYP GGLHDYRPGC QGLVHHRTAG 420 VFMKHVHEVT VKDVNLHWER SGVEDWDLPV DFEPRTIGRL WMSNFTSSA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02218 | PLN02218 | 9.0e-8 | 44 | 397 | 375 | + polygalacturonase ADPG | ||
| pfam00295 | Glyco_hydro_28 | 6.0e-8 | 125 | 391 | 291 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| pfam12708 | Pectate_lyase_3 | 3.0e-8 | 44 | 220 | 185 | + Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. | ||
| PLN02188 | PLN02188 | 2.0e-9 | 44 | 393 | 379 | + polygalacturonase/glycoside hydrolase family protein | ||
| COG5434 | PGU1 | 4.0e-38 | 44 | 324 | 317 | + Endopygalactorunase [Cell envelope biogenesis, outer membrane] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001769606.1 | 0 | 45 | 456 | 1 | 411 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001783745.1 | 0 | 40 | 468 | 30 | 457 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002282920.1 | 0 | 7 | 469 | 8 | 466 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002282925.1 | 0 | 7 | 469 | 8 | 461 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002322693.1 | 0 | 33 | 468 | 3 | 440 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2uvf_B | 6e-20 | 18 | 282 | 131 | 444 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 2uvf_A | 6e-20 | 18 | 282 | 131 | 444 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 2uve_B | 6e-20 | 18 | 282 | 131 | 444 | A Chain A, Structure Of Yersinia Enterocolitica Family 28 Exopolygalacturonase |
| PDB | 2uve_A | 6e-20 | 18 | 282 | 131 | 444 | A Chain A, Structure Of Yersinia Enterocolitica Family 28 Exopolygalacturonase |
| PDB | 3jur_D | 5e-16 | 43 | 254 | 28 | 267 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
