| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 476906 |
| Family | GH35 |
| Protein Properties | Length: 819 Molecular Weight: 92346.1 Isoelectric Point: 9.4491 |
| Chromosome | Chromosome/Scaffold: 2 Start: 17629418 End: 17633956 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 32 | 336 | 0 |
| LIIDGQHKILFSGSIHYTRSTPQMWPSLIAKAKSGGIDVIDTYVFWNIHEPQQGQFDFSGRRDIVKFIKEVKAHGLYVCLRIGPFIQGEWSYGGLPFWLH NVQGIVFRTDNEPFKYHMKRYAQMIVKLMKSENLYASQGGPIILSQIENEYGMVARAFRQDGKSYVKWAAKLAVELDTGVPWVMCKQDDAPDPLVNACNG RQCGETFKGPNSPNKPAIWTENWTSFYQTYGEEPLIRSAEDIAFHVALFIAKNGSFVNYYMYHGGTNFGRNASQFVITSYYDQAPLDEYGLLRQPKWGHL KELHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 819 Download |
| MTTFQYSLAF FVLMAVIVAR DAANVTYDGR SLIIDGQHKI LFSGSIHYTR STPQMWPSLI 60 AKAKSGGIDV IDTYVFWNIH EPQQGQFDFS GRRDIVKFIK EVKAHGLYVC LRIGPFIQGE 120 WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAQMIVKLM KSENLYASQG GPIILSQIEN 180 EYGMVARAFR QDGKSYVKWA AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG 240 PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG 300 RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT 360 AFVFGKKANL CAALLVNQDK CDCTVQFRNS SYRLSPKSIS VLPDCKNVAF NTAKVNAQYN 420 TRTRKPRQNL SSPHMWEKFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFEQSE 480 GAPSVLKVNH LGHVLHAFVN ERFIGSMHGT FKAHSFLLEK NMSLNNGTNN MALLSVMVGL 540 PNSGAHLERR VVGSRSVNIW NGSYQLFFNN YSWGYQVGLK GEKYHVYTED GAKKVQWKQY 600 RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF YTSKGNPSQI 660 WYHIPRSFLK PNSNLLVILE EEREGYPLGI TIDTVSVTEV CGHVSNTHPH PVISPRKKGH 720 NRNEQRHLKY RYDRKPKVQL QCPTGRKISK VLFATFGNPN GSCGSYSVGS CHSPNSLAVV 780 QKACLRKSRC SVPVWSKTFG GDLCPQTVKS LLVRAQCS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 9.0e-5 | 56 | 191 | 159 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 8.0e-22 | 740 | 817 | 82 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 6.0e-22 | 25 | 328 | 363 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-156 | 31 | 338 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 818 | 856 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG29193.1 | 0 | 14 | 818 | 1 | 780 | AC078898_3 beta-galactosidase, putative [Arabidopsis thaliana] |
| GenBank | AAG51670.1 | 0 | 1 | 636 | 1 | 636 | AC010704_14 putative beta-galactosidase, 3' partial; 3669-1 [Arabidopsis thaliana] |
| DDBJ | BAC43014.1 | 0 | 1 | 800 | 1 | 797 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_177866.2 | 0 | 1 | 818 | 1 | 815 | BGAL16 (beta-galactosidase 16); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
| RefSeq | XP_002302225.1 | 0 | 18 | 818 | 1 | 798 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 7.00005e-41 | 31 | 334 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.000008 | 592 | 680 | 493 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 3e-32 | 25 | 345 | 11 | 342 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 3e-32 | 25 | 345 | 11 | 342 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 3e-32 | 25 | 345 | 11 | 342 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
