| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10030124m |
| Family | GH35 |
| Protein Properties | Length: 833 Molecular Weight: 94235.8 Isoelectric Point: 9.0544 |
| Chromosome | Chromosome/Scaffold: 8 Start: 1026860 End: 1031230 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 38 | 342 | 0 |
| LIINGKREILFSGSIHYTRSTPDMWPDLIQKAKRGGLNVIQTYVFWNIHEPVQGQYNFQGQYDLVKFIKMIGEHGMYASLRLGPFIQAEWNHGGLPYWLR EVQNITFRSDNEPFKYHMKKYVTMIIKKMKDEKLFASQGGPIILVQIENEYSTIQLAYREKGNKYVQWTGNLAVGMNIGVPWVMCKQKDAPDPIINTCNG RYCGDTFTGPNKPNKPSLWTENWTAQFRVYGDPPSQRSVEDLAFSTARFISRNGTLINYYMYHGGTNFGRTSANFVTTRYYDEAPLDEFGLQRDPKWGHL KDLHR | |||
| Full Sequence |
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| Protein Sequence Length: 833 Download |
| MVMSSFLFLI TTLLSLLASF AVADGNKTLG VTYDGRSLII NGKREILFSG SIHYTRSTPD 60 MWPDLIQKAK RGGLNVIQTY VFWNIHEPVQ GQYNFQGQYD LVKFIKMIGE HGMYASLRLG 120 PFIQAEWNHG GLPYWLREVQ NITFRSDNEP FKYHMKKYVT MIIKKMKDEK LFASQGGPII 180 LVQIENEYST IQLAYREKGN KYVQWTGNLA VGMNIGVPWV MCKQKDAPDP IINTCNGRYC 240 GDTFTGPNKP NKPSLWTENW TAQFRVYGDP PSQRSVEDLA FSTARFISRN GTLINYYMYH 300 GGTNFGRTSA NFVTTRYYDE APLDEFGLQR DPKWGHLKDL HRALKLCKKA LLWGYPSVQK 360 LGQDLEAIVY EGHGACAAFL SNNSTYMAKT ISFRGRNYYL PSKSISILPD CQTVVYNTQT 420 IVSQHNSRNF VPSVVANKRL SWDWETYTES IPTFEQLENK ATNPLELFNL TKDTTDYAWY 480 SMIITLGRGD LPMRANASPV LIVASLGHAL VAFVNGEYVG NGHGSHLDKS FVFRKPIKLK 540 EGPNHIQILG SVVGFPDSGA YMEKRFAGPH RVEILGLNTG TLELTKNRWA HQVGLYGEEA 600 KIFTLGGLNK VKWTKIEGKR PALTWFKTYF DAPEGNHPIA IQMNRMGKGM IWINGQSIGR 660 YWISYLSPLG QPTQSEYHIP RSYLKPTGNL MVILEEEEEA RPEEIKFVVV DRDTICSYIS 720 DIHPPPVQSW GSKNNVSEYT ANNRKASAVL TCPDFKVITN VQFASYGDSI GICGGYQYGN 780 CNAQDTKEVV ERFCLGKHTC QIPFEKELLI RNWDPCPNVK KSLAVQVKCG FK* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-6 | 59 | 188 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 4.0e-15 | 750 | 829 | 88 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 3.0e-20 | 31 | 188 | 168 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 5.0e-153 | 37 | 344 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 28 | 829 | 829 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS76480.1 | 0 | 1 | 830 | 1 | 843 | beta-galactosidase [Gossypium hirsutum] |
| GenBank | ACC60982.1 | 0 | 23 | 832 | 20 | 829 | beta-galactosidase 2 precursor [Petunia x hybrida] |
| RefSeq | XP_002278545.1 | 0 | 9 | 832 | 8 | 832 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306183.1 | 0 | 22 | 832 | 22 | 829 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 1 | 832 | 1 | 828 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 8.99998e-41 | 37 | 340 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-38 | 27 | 327 | 7 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-38 | 27 | 327 | 7 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
