| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10019784 |
| Family | GH35 |
| Protein Properties | Length: 817 Molecular Weight: 91547.5 Isoelectric Point: 8.8898 |
| Chromosome | Chromosome/Scaffold: 1491 Start: 20357 End: 25211 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 26 | 330 | 0 |
| LIINGKRELLFSGSIHYPRSTPDMWPKLLEDAKRGGINVIQTYTFWNIHEPEEGKFNFEGRFDVIKFFKLIGEHGLYATVRFGPFIQAEWNHGGLPYWLR EIPNIIFRSYNEPYKQHMERFVRMMVEKLRDANLFAEQGGPIILAQIENEYNTVQLAYRELGTKYIQWAGNLALGFNVGVPWVMCKQHDAPGPVINACNG RHCGDTFGGPNAPNKPALWTENWTAQFRVFGDPPSQRSVEDTAFAVVRWFSKNGSLVNYYMYHGGSNFARTAASFVTTRYYDEAPLDEFGLERGPKYGHL KDVHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 817 Download |
| MTSSVIAREE KKIHKGQAVT YDGKSLIING KRELLFSGSI HYPRSTPDMW PKLLEDAKRG 60 GINVIQTYTF WNIHEPEEGK FNFEGRFDVI KFFKLIGEHG LYATVRFGPF IQAEWNHGGL 120 PYWLREIPNI IFRSYNEPYK QHMERFVRMM VEKLRDANLF AEQGGPIILA QIENEYNTVQ 180 LAYRELGTKY IQWAGNLALG FNVGVPWVMC KQHDAPGPVI NACNGRHCGD TFGGPNAPNK 240 PALWTENWTA QFRVFGDPPS QRSVEDTAFA VVRWFSKNGS LVNYYMYHGG SNFARTAASF 300 VTTRYYDEAP LDEFGLERGP KYGHLKDVHK AINLCKRALL WGSPSSQRLN PDVEVRIYEQ 360 PGTDVCAAFL TNNHTRLGHT ANFKGQKYYL PPRSISVLPD CKTVVLNTAT IVAQHNSRNF 420 LKSQVANKLD WKMITETIPS DLNVTSATPM ELYFLTKDKT DYAWYTTTIN LDPRDLSMRK 480 DILPVLRVAS LGHAMLAFNN GQFIGSAHGS QIDKSFVLQK SIELKPGINK ISLLGTLVGL 540 PDSGAYMEHR FAGPRGVSIL GMNTGTLDLS QNGWGHQAGL KGEHDELFTK EGAKKAKWNN 600 IPKGGKGPPL TWYKAKFDAP EGNDPVAVSM YGMIKGMIWI NGESIGRYWM SYVSPLGEST 660 QAEYHIPRSY LKPKDNLIVV LEEESAHPRN ITIMTVNRDT ICSDVSEMSP PSVRQWERKD 720 DKFRPVGTEV KLAAHLRCPH GKKIAVVDFA SYGDPYGACG GFAQGRCHSP VSKQVVEQQC 780 LGKDSCDVPL EKGLFNKNGD LCPEVKKTLS VQVTCR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 5.0e-7 | 47 | 176 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 9.0e-19 | 736 | 815 | 83 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 7.0e-20 | 19 | 176 | 169 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-143 | 25 | 332 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 14 | 815 | 831 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS76480.1 | 0 | 9 | 815 | 37 | 842 | beta-galactosidase [Gossypium hirsutum] |
| GenBank | ACC60982.1 | 0 | 17 | 815 | 26 | 826 | beta-galactosidase 2 precursor [Petunia x hybrida] |
| RefSeq | XP_002278545.1 | 0 | 13 | 815 | 25 | 829 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306183.1 | 0 | 5 | 815 | 21 | 826 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 15 | 815 | 27 | 825 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2e-35 | 25 | 328 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0007 | 611 | 682 | 509 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 7e-33 | 19 | 328 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.003 | 573 | 710 | 503 | 630 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 7e-33 | 19 | 328 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO778160 | 700 | 18 | 693 | 0 |
| CO128575 | 295 | 48 | 342 | 0 |
| HO780602 | 593 | 69 | 654 | 0 |
| CO121155 | 290 | 74 | 363 | 0 |
| CO101350 | 288 | 99 | 386 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
