| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10006573m |
| Family | GH35 |
| Protein Properties | Length: 847 Molecular Weight: 95698.7 Isoelectric Point: 9.837 |
| Chromosome | Chromosome/Scaffold: 7 Start: 1994104 End: 1998146 |
| Description | beta-galactosidase 11 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 48 | 352 | 0 |
| LIIDGKRELLYSGSIHYPRSTPEMWPSIIKRAKQGGLNTIQTYVFWNVHEPEQGKFNFSGRADLVKFIKLIEKNGMYVTLRLGPFIQAEWTHGGLPYWLR EVPGIFFRTDNKPFKEHTERYVRMVLDKMKEEKLFAAQGGPIILGQIENEYSAVQRAYKQDGLNYIKWASKLVDSMNLGIPWVMCKQNDAPDPMINACNG RHCGDTFPGPNKENKPSLWTENWTTQFRVFGDPPTQRSVEDIAFSVARFFSKNGSHVNYYMYHGGTNFGRTSAHYVTTRYYDDAPLDEYGLEKEPKYGHL KQLHN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 847 Download |
| MRKHSLDRWL LTAVLVVLLS SSSSFAAKKD AKKKKKSNKD VTYDGTSLII DGKRELLYSG 60 SIHYPRSTPE MWPSIIKRAK QGGLNTIQTY VFWNVHEPEQ GKFNFSGRAD LVKFIKLIEK 120 NGMYVTLRLG PFIQAEWTHG GLPYWLREVP GIFFRTDNKP FKEHTERYVR MVLDKMKEEK 180 LFAAQGGPII LGQIENEYSA VQRAYKQDGL NYIKWASKLV DSMNLGIPWV MCKQNDAPDP 240 MINACNGRHC GDTFPGPNKE NKPSLWTENW TTQFRVFGDP PTQRSVEDIA FSVARFFSKN 300 GSHVNYYMYH GGTNFGRTSA HYVTTRYYDD APLDEYGLEK EPKYGHLKQL HNALNLCKKP 360 LLWGQPKTEK PGKDTEIRYY EQPGTKTCAA FLANNNTEAA ETIKFKGREY VIAPRSISIL 420 PDCKTVLYNT AQIVSQHTSR NFMKSKKANK KFAFKVFSET LPSKLEGDSY IPVELYGLTK 480 DRSDYGWYTT SFKVHKNHLP KKEVKTFVRI ASLGHALHVW LNGEYLGSGH GSHEEKSFVF 540 QKQVTLKAGS ENHLVMLGVL TGFPDSGSYM EHRYTGPRSV SILGLTSGTL DLTETSKWGN 600 KVGMEGEKLG IHTEEGLKKV KWQKFTGKAQ GLTWYQTYFD APESLNAAAI RMHGMGKGLI 660 WVNGEGVGRY WQSFLSPLGQ PTQIEYHIPR SFLKPKKNLL VIFEEEPNVK PELMDFVIVN 720 RDTVCSYVGE NYIPSVRHWT RKQDQVQAIT DNVTLTATLK CSGTRKIAAV EFASFGNPIG 780 VCGNFTLGTC NAPISKQVVE KHCLGKAQCA IPVNKSTFEQ DKKDSCKDVV KMLAVQVKCG 840 RGKKKN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 7.0e-9 | 63 | 198 | 150 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 1.0e-16 | 759 | 839 | 85 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 1.0e-23 | 41 | 198 | 164 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-152 | 47 | 354 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 41 | 839 | 826 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD24606.1 | 0 | 44 | 844 | 31 | 831 | putative beta-galactosidase [Arabidopsis thaliana] |
| EMBL | CAA17766.1 | 0 | 37 | 844 | 50 | 830 | beta-galactosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_179264.2 | 0 | 40 | 844 | 43 | 847 | BGAL13; beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_567973.1 | 0 | 1 | 844 | 1 | 844 | BGAL11 (beta-galactosidase 11); beta-galactosidase [Arabidopsis thaliana] |
| Swiss-Prot | Q9SCU8 | 0 | 1 | 845 | 7 | 843 | BGL14_ARATH RecName: Full=Beta-galactosidase 14; Short=Lactase 14; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 3.00004e-41 | 46 | 350 | 13 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.01 | 607 | 704 | 465 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-35 | 40 | 350 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-35 | 40 | 350 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
