| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna06055.1-v1.0-hybrid |
| Family | GH35 |
| Protein Properties | Length: 1413 Molecular Weight: 158167 Isoelectric Point: 7.6681 |
| Chromosome | Chromosome/Scaffold: 4 Start: 16578952 End: 16587416 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 1 | 282 | 0 |
| MWPDLLRKAKHGGLNVIQTYVFWNVHEPVKGHYNFSGNYDLVRFIKLVQEHGMYVTIRVGPFIQAEWNHGGLPYWLREVPDLIFRTDNAPYKYYMKKYVT MIVNKLKEAKLFSPQGGPIILAQIENEYNHIQLAYEENGSNYVRWAAKMAVKQNVGVPWIMCKQTDAPDPAINTCNGRHCGDSFSGANKPYKPALWTENW TGQYRVFGDPASQRPAEDIAFSVARFFSKNGSLANYYMYHGGTNFGRTSAIFTTTRYYDEAPLDEYGLPRDPKWSHLKDLHK | |||
| Full Sequence |
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| Protein Sequence Length: 1413 Download |
| MWPDLLRKAK HGGLNVIQTY VFWNVHEPVK GHYNFSGNYD LVRFIKLVQE HGMYVTIRVG 60 PFIQAEWNHG GLPYWLREVP DLIFRTDNAP YKYYMKKYVT MIVNKLKEAK LFSPQGGPII 120 LAQIENEYNH IQLAYEENGS NYVRWAAKMA VKQNVGVPWI MCKQTDAPDP AINTCNGRHC 180 GDSFSGANKP YKPALWTENW TGQYRVFGDP ASQRPAEDIA FSVARFFSKN GSLANYYMYH 240 GGTNFGRTSA IFTTTRYYDE APLDEYGLPR DPKWSHLKDL HKALRLCRKP LLWGVPGVQN 300 LGKNIEARFY ELKGNSSICA AFLANNNSRS EAIVNWRGQD YYLPPHSISI LPDCKTVVYN 360 TQTIVSQHNA RSFVGSNLAN KMRWMESPEP IPSTKEIPIN NRTPLELYGL LKDNSDYAWY 420 TTSLELNSMD MSMKKSIQPV LRVGSLGHAM LVFVNGEYVG SGHGSHDEKS FVFEKVVSFK 480 AGVNQIALLA MTVGLPDSGA YMEHRYAGPK DIVVLGLNTG TLDLTQNGWG HQVGLNGEKL 540 RAFTKEGSKQ VQWGETNGPK KALTWYKTYF DAPEGNDPVA IRMTGMGKGM IWVNGESIGR 600 HWISFLSPLG QPTQSEYHIP RSFIKPRKNL LVVLEEELAK PSSIDIVTVN RDTICSFITE 660 YHPPNVKSWA RQNSVFRPVL DVVRTSAELK CPNYKKVVAV EFASFGDPTG SCGSYTLGKC 720 NSPVSKEVVE QHCLGNTSCV VPIDRNVYFK NNDECPDIKK TLAIQMEQRK WEDLDKDCLV 780 KVFEKVDMES LLLDIPFVCK SWHKETLNPS CWNSLIFPDF EPEFPYNERD YPIFDRFVSE 840 FGLDRDHFSV TAFIKFVVNR SQGNAVSLKL PGCSSLEAFE YVTDECPNIM FFGLPRCLLW 900 KDDIDLELMG KFKNLFMLAL GCSTYLDRVL AVVNKHCKLF SHLILSNAQI GKKEATAIVN 960 LIPDIKLLSL NDAQIDRDYL IILLKGCKEL VMLEAKDCIG FDEGDDEIAK MASHRLMQRQ 1020 RLMERVRVRV RERERLILKI GLNLDLALYN EQAGGDSYPF LGSLRGMESE GEAFGSRRQR 1080 ETGSLEEGRG LSFNGGMLIL AEYDGLSPME DVSLHYLEVW VSVTELRFAM RNNMVLSHAV 1140 NGLGVFVRAD LGPIQRKEKI QRVRVVLDVR NRIPAKRIFD YSPEVAVKLE FKVERAHGIC 1200 KDCGYFGHGG GTCDKGSICG LPMVNVVSVV DCEAELLASR SMDGLLKEPV LQVDEAAPTG 1260 LEVGMSGNEE AVALVVTPPT FSAGNPSFKL GLTNGIGLGG FRGPLRIGPG DSGFKRKFGF 1320 GSESDGFGLS GDGPAGTDLM LKKPKSSFSG ELVEVPVQFG RIPQKKSPKK RGRPRGSRNK 1380 KRTMNGDPEF SMAPSLEGAN VETGLESEAE EE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 2.0e-7 | 2 | 128 | 141 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 4.0e-12 | 1 | 128 | 139 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 4.0e-14 | 689 | 765 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 4.0e-131 | 1 | 284 | 298 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 765 | 790 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-34 | 2 | 280 | 39 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.004 | 548 | 645 | 493 | 580 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-33 | 2 | 267 | 42 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.002 | 528 | 663 | 503 | 630 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-33 | 2 | 267 | 42 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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